Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trove2O08848 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trove2O08848 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trove2O08848 Gm6184-201ENSMUST00000120403 1261 ntBASIC14.68□□□□□ -0.06
Trove2O08848 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.68□□□□□ -0.06
Trove2O08848 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Trove2O08848 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC14.68□□□□□ -0.06
Trove2O08848 Gm43767-201ENSMUST00000198933 381 ntBASIC14.68□□□□□ -0.06
Trove2O08848 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC14.68□□□□□ -0.06
Trove2O08848 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trove2O08848 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trove2O08848 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trove2O08848 Gm5184-201ENSMUST00000220417 1702 ntBASIC14.68□□□□□ -0.06
Trove2O08848 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.68□□□□□ -0.06
Trove2O08848 Gm5422-201ENSMUST00000050717 2721 ntBASIC14.68□□□□□ -0.06
Trove2O08848 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trove2O08848 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trove2O08848 Gm43364-201ENSMUST00000196046 3274 ntBASIC14.68□□□□□ -0.06
Trove2O08848 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC14.68□□□□□ -0.06
Trove2O08848 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trove2O08848 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trove2O08848 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
Trove2O08848 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trove2O08848 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trove2O08848 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trove2O08848 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trove2O08848 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC14.67□□□□□ -0.06
Trove2O08848 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trove2O08848 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trove2O08848 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trove2O08848 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trove2O08848 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Trove2O08848 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Trove2O08848 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Trove2O08848 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Trove2O08848 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trove2O08848 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trove2O08848 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC14.67□□□□□ -0.06
Trove2O08848 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Trove2O08848 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC14.67□□□□□ -0.06
Trove2O08848 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Trove2O08848 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC14.67□□□□□ -0.06
Trove2O08848 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC14.67□□□□□ -0.06
Trove2O08848 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trove2O08848 Gm45167-201ENSMUST00000208007 322 ntBASIC14.67□□□□□ -0.06
Trove2O08848 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trove2O08848 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trove2O08848 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trove2O08848 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trove2O08848 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trove2O08848 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trove2O08848 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trove2O08848 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trove2O08848 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC14.67□□□□□ -0.06
Trove2O08848 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trove2O08848 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trove2O08848 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trove2O08848 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trove2O08848 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trove2O08848 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trove2O08848 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trove2O08848 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trove2O08848 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trove2O08848 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trove2O08848 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trove2O08848 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trove2O08848 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.66□□□□□ -0.06
Trove2O08848 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trove2O08848 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trove2O08848 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trove2O08848 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Trove2O08848 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trove2O08848 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trove2O08848 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC14.66□□□□□ -0.06
Trove2O08848 Mir5131-201ENSMUST00000175426 93 ntBASIC14.66□□□□□ -0.06
Trove2O08848 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC14.66□□□□□ -0.06
Trove2O08848 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trove2O08848 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trove2O08848 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trove2O08848 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trove2O08848 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trove2O08848 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Trove2O08848 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trove2O08848 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trove2O08848 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Trove2O08848 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trove2O08848 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trove2O08848 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trove2O08848 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trove2O08848 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC14.66□□□□□ -0.06
Trove2O08848 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Trove2O08848 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Trove2O08848 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trove2O08848 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trove2O08848 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Trove2O08848 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trove2O08848 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trove2O08848 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trove2O08848 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Trove2O08848 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms