Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shisa8J3QNX5 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Shisa8J3QNX5 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shisa8J3QNX5 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC13.04□□□□□ -0.32
Shisa8J3QNX5 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC13.04□□□□□ -0.32
Shisa8J3QNX5 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC13.04□□□□□ -0.32
Shisa8J3QNX5 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shisa8J3QNX5 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shisa8J3QNX5 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Shisa8J3QNX5 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.04□□□□□ -0.32
Shisa8J3QNX5 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shisa8J3QNX5 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.04□□□□□ -0.32
Shisa8J3QNX5 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shisa8J3QNX5 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Shisa8J3QNX5 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shisa8J3QNX5 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shisa8J3QNX5 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shisa8J3QNX5 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Shisa8J3QNX5 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Shisa8J3QNX5 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shisa8J3QNX5 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Shisa8J3QNX5 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Shisa8J3QNX5 AC164565.1-201ENSMUST00000217520 1484 ntBASIC13.04□□□□□ -0.32
Shisa8J3QNX5 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shisa8J3QNX5 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shisa8J3QNX5 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shisa8J3QNX5 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shisa8J3QNX5 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shisa8J3QNX5 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Shisa8J3QNX5 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Shisa8J3QNX5 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Shisa8J3QNX5 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.03□□□□□ -0.32
Shisa8J3QNX5 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
Shisa8J3QNX5 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shisa8J3QNX5 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shisa8J3QNX5 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shisa8J3QNX5 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Shisa8J3QNX5 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shisa8J3QNX5 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shisa8J3QNX5 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shisa8J3QNX5 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
Shisa8J3QNX5 Gm7222-201ENSMUST00000117512 906 ntBASIC13.03□□□□□ -0.32
Shisa8J3QNX5 Gm15173-201ENSMUST00000122049 433 ntBASIC13.03□□□□□ -0.32
Shisa8J3QNX5 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC13.03□□□□□ -0.32
Shisa8J3QNX5 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shisa8J3QNX5 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC13.03□□□□□ -0.32
Shisa8J3QNX5 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Shisa8J3QNX5 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Shisa8J3QNX5 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shisa8J3QNX5 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shisa8J3QNX5 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shisa8J3QNX5 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Shisa8J3QNX5 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shisa8J3QNX5 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shisa8J3QNX5 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shisa8J3QNX5 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
Shisa8J3QNX5 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Shisa8J3QNX5 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shisa8J3QNX5 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shisa8J3QNX5 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.03□□□□□ -0.32
Shisa8J3QNX5 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shisa8J3QNX5 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shisa8J3QNX5 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Shisa8J3QNX5 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shisa8J3QNX5 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Shisa8J3QNX5 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shisa8J3QNX5 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Shisa8J3QNX5 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Shisa8J3QNX5 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.02□□□□□ -0.32
Shisa8J3QNX5 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Shisa8J3QNX5 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Shisa8J3QNX5 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Shisa8J3QNX5 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Shisa8J3QNX5 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Shisa8J3QNX5 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Shisa8J3QNX5 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.02□□□□□ -0.32
Shisa8J3QNX5 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Shisa8J3QNX5 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Shisa8J3QNX5 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Shisa8J3QNX5 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Shisa8J3QNX5 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Shisa8J3QNX5 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.32
Shisa8J3QNX5 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Shisa8J3QNX5 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Shisa8J3QNX5 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Shisa8J3QNX5 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Shisa8J3QNX5 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
Shisa8J3QNX5 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Shisa8J3QNX5 Gm14042-201ENSMUST00000120139 833 ntBASIC13.02□□□□□ -0.33
Shisa8J3QNX5 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Shisa8J3QNX5 Gm18669-201ENSMUST00000216049 778 ntBASIC13.02□□□□□ -0.33
Shisa8J3QNX5 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Shisa8J3QNX5 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Shisa8J3QNX5 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Shisa8J3QNX5 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Shisa8J3QNX5 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Shisa8J3QNX5 Gm9252-201ENSMUST00000172364 1602 ntBASIC13.02□□□□□ -0.33
Shisa8J3QNX5 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Shisa8J3QNX5 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Shisa8J3QNX5 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms