Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Gm37230-201ENSMUST00000194491 818 ntBASIC17.13■□□□□ 0.33
NpcdF8VQB8 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC17.13■□□□□ 0.33
NpcdF8VQB8 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NpcdF8VQB8 Gm17795-201ENSMUST00000214505 757 ntBASIC17.13■□□□□ 0.33
NpcdF8VQB8 AC154276.1-201ENSMUST00000228874 1299 ntBASIC17.13■□□□□ 0.33
NpcdF8VQB8 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NpcdF8VQB8 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NpcdF8VQB8 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NpcdF8VQB8 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NpcdF8VQB8 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC17.13■□□□□ 0.33
NpcdF8VQB8 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC17.13■□□□□ 0.33
NpcdF8VQB8 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
NpcdF8VQB8 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC17.13■□□□□ 0.33
NpcdF8VQB8 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
NpcdF8VQB8 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NpcdF8VQB8 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NpcdF8VQB8 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NpcdF8VQB8 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NpcdF8VQB8 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
NpcdF8VQB8 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NpcdF8VQB8 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
NpcdF8VQB8 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NpcdF8VQB8 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NpcdF8VQB8 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NpcdF8VQB8 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NpcdF8VQB8 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
NpcdF8VQB8 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NpcdF8VQB8 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
NpcdF8VQB8 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
NpcdF8VQB8 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NpcdF8VQB8 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
NpcdF8VQB8 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC17.12■□□□□ 0.33
NpcdF8VQB8 AC123645.1-201ENSMUST00000228469 605 ntBASIC17.12■□□□□ 0.33
NpcdF8VQB8 Mxra8os-201ENSMUST00000097740 687 ntBASIC17.12■□□□□ 0.33
NpcdF8VQB8 AC154412.1-201ENSMUST00000226540 2786 ntBASIC17.12■□□□□ 0.33
NpcdF8VQB8 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
NpcdF8VQB8 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NpcdF8VQB8 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NpcdF8VQB8 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC17.12■□□□□ 0.33
NpcdF8VQB8 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC17.12■□□□□ 0.33
NpcdF8VQB8 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
NpcdF8VQB8 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
NpcdF8VQB8 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NpcdF8VQB8 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
NpcdF8VQB8 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NpcdF8VQB8 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
NpcdF8VQB8 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC17.11■□□□□ 0.33
NpcdF8VQB8 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NpcdF8VQB8 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NpcdF8VQB8 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NpcdF8VQB8 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NpcdF8VQB8 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NpcdF8VQB8 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NpcdF8VQB8 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC17.11■□□□□ 0.33
NpcdF8VQB8 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NpcdF8VQB8 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NpcdF8VQB8 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
NpcdF8VQB8 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC17.11■□□□□ 0.33
NpcdF8VQB8 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NpcdF8VQB8 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NpcdF8VQB8 Gm45667-201ENSMUST00000210380 1316 ntBASIC17.11■□□□□ 0.33
NpcdF8VQB8 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NpcdF8VQB8 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NpcdF8VQB8 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NpcdF8VQB8 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC17.11■□□□□ 0.33
NpcdF8VQB8 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NpcdF8VQB8 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
NpcdF8VQB8 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
NpcdF8VQB8 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
NpcdF8VQB8 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NpcdF8VQB8 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NpcdF8VQB8 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NpcdF8VQB8 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NpcdF8VQB8 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC17.1■□□□□ 0.33
NpcdF8VQB8 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NpcdF8VQB8 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NpcdF8VQB8 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
NpcdF8VQB8 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
NpcdF8VQB8 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC17.1■□□□□ 0.33
NpcdF8VQB8 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC17.1■□□□□ 0.33
NpcdF8VQB8 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NpcdF8VQB8 Rn7s1-201ENSMUST00000174924 300 ntBASIC17.1■□□□□ 0.33
NpcdF8VQB8 Rn7s2-201ENSMUST00000175032 300 ntBASIC17.1■□□□□ 0.33
NpcdF8VQB8 Gm26461-201ENSMUST00000175064 290 ntBASIC17.1■□□□□ 0.33
NpcdF8VQB8 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC17.1■□□□□ 0.33
NpcdF8VQB8 Gm27514-201ENSMUST00000183692 110 ntBASIC17.1■□□□□ 0.33
NpcdF8VQB8 Gm5370-201ENSMUST00000187187 574 ntBASIC17.1■□□□□ 0.33
NpcdF8VQB8 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NpcdF8VQB8 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NpcdF8VQB8 Olfr286-202ENSMUST00000205305 969 ntBASIC17.1■□□□□ 0.33
NpcdF8VQB8 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NpcdF8VQB8 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NpcdF8VQB8 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
NpcdF8VQB8 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NpcdF8VQB8 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
NpcdF8VQB8 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NpcdF8VQB8 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
NpcdF8VQB8 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
NpcdF8VQB8 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
NpcdF8VQB8 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms