Protein–RNA interactions for Protein: F6V035

Ccdc149, Coiled-coil domain-containing 149, mousemouse

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc149F6V035 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc149F6V035 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Ccdc149F6V035 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc149F6V035 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc149F6V035 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc149F6V035 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc149F6V035 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc149F6V035 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc149F6V035 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc149F6V035 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc149F6V035 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc149F6V035 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Ccdc149F6V035 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC14.48□□□□□ -0.09
Ccdc149F6V035 Gm10766-202ENSMUST00000194123 606 ntBASIC14.48□□□□□ -0.09
Ccdc149F6V035 Gm37917-201ENSMUST00000194711 392 ntBASIC14.48□□□□□ -0.09
Ccdc149F6V035 Gm18018-201ENSMUST00000198273 408 ntBASIC14.48□□□□□ -0.09
Ccdc149F6V035 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC14.48□□□□□ -0.09
Ccdc149F6V035 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC14.48□□□□□ -0.09
Ccdc149F6V035 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc149F6V035 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.48□□□□□ -0.09
Ccdc149F6V035 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc149F6V035 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc149F6V035 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Ccdc149F6V035 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc149F6V035 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc149F6V035 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc149F6V035 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
Ccdc149F6V035 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc149F6V035 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc149F6V035 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc149F6V035 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc149F6V035 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc149F6V035 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Ccdc149F6V035 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc149F6V035 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc149F6V035 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc149F6V035 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc149F6V035 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.47□□□□□ -0.09
Ccdc149F6V035 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc149F6V035 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc149F6V035 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc149F6V035 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc149F6V035 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc149F6V035 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc149F6V035 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc149F6V035 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc149F6V035 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC14.47□□□□□ -0.09
Ccdc149F6V035 Gm4804-201ENSMUST00000182234 999 ntBASIC14.47□□□□□ -0.09
Ccdc149F6V035 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC14.47□□□□□ -0.09
Ccdc149F6V035 Gm6745-201ENSMUST00000199216 526 ntBASIC14.47□□□□□ -0.09
Ccdc149F6V035 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC14.47□□□□□ -0.09
Ccdc149F6V035 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc149F6V035 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc149F6V035 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc149F6V035 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.47□□□□□ -0.09
Ccdc149F6V035 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc149F6V035 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc149F6V035 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc149F6V035 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc149F6V035 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc149F6V035 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc149F6V035 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc149F6V035 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC14.47□□□□□ -0.09
Ccdc149F6V035 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Ccdc149F6V035 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc149F6V035 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Ccdc149F6V035 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc149F6V035 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc149F6V035 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc149F6V035 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Ccdc149F6V035 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc149F6V035 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc149F6V035 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
Ccdc149F6V035 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc149F6V035 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Ccdc149F6V035 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
Ccdc149F6V035 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc149F6V035 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc149F6V035 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC14.46□□□□□ -0.09
Ccdc149F6V035 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC14.46□□□□□ -0.09
Ccdc149F6V035 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC14.46□□□□□ -0.09
Ccdc149F6V035 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC14.46□□□□□ -0.09
Ccdc149F6V035 Gm21470-201ENSMUST00000187680 696 ntBASIC14.46□□□□□ -0.09
Ccdc149F6V035 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Ccdc149F6V035 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Ccdc149F6V035 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC14.46□□□□□ -0.09
Ccdc149F6V035 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC14.46□□□□□ -0.09
Ccdc149F6V035 Ighv8-14-201ENSMUST00000196781 358 ntBASIC14.46□□□□□ -0.09
Ccdc149F6V035 Gm5425-201ENSMUST00000214125 459 ntBASIC14.46□□□□□ -0.09
Ccdc149F6V035 Gm19220-201ENSMUST00000222682 803 ntBASIC14.46□□□□□ -0.09
Ccdc149F6V035 AC154687.2-201ENSMUST00000223853 640 ntBASIC14.46□□□□□ -0.09
Ccdc149F6V035 AC155729.1-201ENSMUST00000227758 544 ntBASIC14.46□□□□□ -0.09
Ccdc149F6V035 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc149F6V035 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC14.46□□□□□ -0.09
Ccdc149F6V035 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.46□□□□□ -0.09
Ccdc149F6V035 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc149F6V035 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc149F6V035 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Ccdc149F6V035 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14.46□□□□□ -0.09
Ccdc149F6V035 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms