Protein–RNA interactions for Protein: F6UCX4

Sptbn5, Spectrin beta, non-erythrocytic 5 (Fragment), mousemouse

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn5F6UCX4 Gm6550-201ENSMUST00000187574 993 ntBASIC17.13■□□□□ 0.33
Sptbn5F6UCX4 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sptbn5F6UCX4 Birc2-201ENSMUST00000054878 378 ntBASIC17.13■□□□□ 0.33
Sptbn5F6UCX4 AC139054.1-201ENSMUST00000226898 1598 ntBASIC17.13■□□□□ 0.33
Sptbn5F6UCX4 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sptbn5F6UCX4 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Sptbn5F6UCX4 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sptbn5F6UCX4 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sptbn5F6UCX4 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Sptbn5F6UCX4 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sptbn5F6UCX4 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sptbn5F6UCX4 Gm14371-201ENSMUST00000138925 1518 ntBASIC17.12■□□□□ 0.33
Sptbn5F6UCX4 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sptbn5F6UCX4 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sptbn5F6UCX4 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sptbn5F6UCX4 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sptbn5F6UCX4 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sptbn5F6UCX4 Gm7230-201ENSMUST00000173026 815 ntBASIC17.12■□□□□ 0.33
Sptbn5F6UCX4 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC17.12■□□□□ 0.33
Sptbn5F6UCX4 Gm34391-201ENSMUST00000203706 907 ntBASIC17.12■□□□□ 0.33
Sptbn5F6UCX4 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sptbn5F6UCX4 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sptbn5F6UCX4 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sptbn5F6UCX4 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC17.12■□□□□ 0.33
Sptbn5F6UCX4 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sptbn5F6UCX4 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sptbn5F6UCX4 Gm38042-201ENSMUST00000191614 5208 ntBASIC17.12■□□□□ 0.33
Sptbn5F6UCX4 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sptbn5F6UCX4 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sptbn5F6UCX4 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sptbn5F6UCX4 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sptbn5F6UCX4 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sptbn5F6UCX4 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
Sptbn5F6UCX4 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Sptbn5F6UCX4 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sptbn5F6UCX4 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Sptbn5F6UCX4 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sptbn5F6UCX4 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sptbn5F6UCX4 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sptbn5F6UCX4 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Sptbn5F6UCX4 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Sptbn5F6UCX4 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Sptbn5F6UCX4 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sptbn5F6UCX4 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Sptbn5F6UCX4 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC17.11■□□□□ 0.33
Sptbn5F6UCX4 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Sptbn5F6UCX4 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sptbn5F6UCX4 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC17.11■□□□□ 0.33
Sptbn5F6UCX4 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC17.11■□□□□ 0.33
Sptbn5F6UCX4 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Sptbn5F6UCX4 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC17.11■□□□□ 0.33
Sptbn5F6UCX4 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC17.11■□□□□ 0.33
Sptbn5F6UCX4 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC17.11■□□□□ 0.33
Sptbn5F6UCX4 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC17.11■□□□□ 0.33
Sptbn5F6UCX4 Gm10459-201ENSMUST00000202708 1155 ntBASIC17.11■□□□□ 0.33
Sptbn5F6UCX4 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sptbn5F6UCX4 AC154595.3-201ENSMUST00000224579 384 ntBASIC17.11■□□□□ 0.33
Sptbn5F6UCX4 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sptbn5F6UCX4 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sptbn5F6UCX4 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sptbn5F6UCX4 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sptbn5F6UCX4 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sptbn5F6UCX4 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sptbn5F6UCX4 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sptbn5F6UCX4 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC17.11■□□□□ 0.33
Sptbn5F6UCX4 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sptbn5F6UCX4 Gm14752-201ENSMUST00000120719 2075 ntBASIC17.11■□□□□ 0.33
Sptbn5F6UCX4 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sptbn5F6UCX4 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sptbn5F6UCX4 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sptbn5F6UCX4 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sptbn5F6UCX4 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sptbn5F6UCX4 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sptbn5F6UCX4 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sptbn5F6UCX4 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sptbn5F6UCX4 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sptbn5F6UCX4 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC17.1■□□□□ 0.33
Sptbn5F6UCX4 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sptbn5F6UCX4 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sptbn5F6UCX4 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sptbn5F6UCX4 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sptbn5F6UCX4 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sptbn5F6UCX4 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Sptbn5F6UCX4 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sptbn5F6UCX4 AC115735.4-201ENSMUST00000227460 1944 ntBASIC17.1■□□□□ 0.33
Sptbn5F6UCX4 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC17.1■□□□□ 0.33
Sptbn5F6UCX4 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sptbn5F6UCX4 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sptbn5F6UCX4 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sptbn5F6UCX4 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sptbn5F6UCX4 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sptbn5F6UCX4 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sptbn5F6UCX4 Gm15173-201ENSMUST00000122049 433 ntBASIC17.1■□□□□ 0.33
Sptbn5F6UCX4 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC17.1■□□□□ 0.33
Sptbn5F6UCX4 Gm16026-204ENSMUST00000162652 683 ntBASIC17.1■□□□□ 0.33
Sptbn5F6UCX4 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC17.1■□□□□ 0.33
Sptbn5F6UCX4 Gm43347-201ENSMUST00000200226 580 ntBASIC17.1■□□□□ 0.33
Sptbn5F6UCX4 Gm45747-201ENSMUST00000212203 999 ntBASIC17.1■□□□□ 0.33
Sptbn5F6UCX4 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sptbn5F6UCX4 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms