Protein–RNA interactions for Protein: F6RGA8

C530025M09Rik, RIKEN cDNA C530025M09 gene, mousemouse

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C530025M09RikF6RGA8 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
C530025M09RikF6RGA8 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC9.41□□□□□ -0.9
C530025M09RikF6RGA8 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
C530025M09RikF6RGA8 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
C530025M09RikF6RGA8 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
C530025M09RikF6RGA8 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
C530025M09RikF6RGA8 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
C530025M09RikF6RGA8 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
C530025M09RikF6RGA8 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
C530025M09RikF6RGA8 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
C530025M09RikF6RGA8 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
C530025M09RikF6RGA8 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
C530025M09RikF6RGA8 Gm43868-201ENSMUST00000205187 2114 ntBASIC9.41□□□□□ -0.9
C530025M09RikF6RGA8 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
C530025M09RikF6RGA8 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
C530025M09RikF6RGA8 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
C530025M09RikF6RGA8 Gm38042-201ENSMUST00000191614 5208 ntBASIC9.41□□□□□ -0.9
C530025M09RikF6RGA8 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC9.41□□□□□ -0.9
C530025M09RikF6RGA8 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
C530025M09RikF6RGA8 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
C530025M09RikF6RGA8 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
C530025M09RikF6RGA8 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC9.41□□□□□ -0.9
C530025M09RikF6RGA8 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
C530025M09RikF6RGA8 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
C530025M09RikF6RGA8 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
C530025M09RikF6RGA8 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
C530025M09RikF6RGA8 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
C530025M09RikF6RGA8 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
C530025M09RikF6RGA8 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
C530025M09RikF6RGA8 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
C530025M09RikF6RGA8 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
C530025M09RikF6RGA8 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC9.4□□□□□ -0.9
C530025M09RikF6RGA8 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
C530025M09RikF6RGA8 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
C530025M09RikF6RGA8 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
C530025M09RikF6RGA8 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
C530025M09RikF6RGA8 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
C530025M09RikF6RGA8 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
C530025M09RikF6RGA8 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
C530025M09RikF6RGA8 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
C530025M09RikF6RGA8 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
C530025M09RikF6RGA8 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
C530025M09RikF6RGA8 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
C530025M09RikF6RGA8 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
C530025M09RikF6RGA8 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
C530025M09RikF6RGA8 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
C530025M09RikF6RGA8 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
C530025M09RikF6RGA8 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
C530025M09RikF6RGA8 Gm5479-201ENSMUST00000160578 435 ntBASIC9.4□□□□□ -0.9
C530025M09RikF6RGA8 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
C530025M09RikF6RGA8 Gm5864-201ENSMUST00000202263 970 ntBASIC9.4□□□□□ -0.9
C530025M09RikF6RGA8 Gm10459-201ENSMUST00000202708 1155 ntBASIC9.4□□□□□ -0.9
C530025M09RikF6RGA8 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
C530025M09RikF6RGA8 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC9.4□□□□□ -0.9
C530025M09RikF6RGA8 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC9.4□□□□□ -0.9
C530025M09RikF6RGA8 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
C530025M09RikF6RGA8 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
C530025M09RikF6RGA8 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC9.4□□□□□ -0.9
C530025M09RikF6RGA8 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.91
C530025M09RikF6RGA8 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
C530025M09RikF6RGA8 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.91
C530025M09RikF6RGA8 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
C530025M09RikF6RGA8 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
C530025M09RikF6RGA8 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC9.4□□□□□ -0.91
C530025M09RikF6RGA8 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC9.4□□□□□ -0.91
C530025M09RikF6RGA8 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
C530025M09RikF6RGA8 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
C530025M09RikF6RGA8 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
C530025M09RikF6RGA8 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
C530025M09RikF6RGA8 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
C530025M09RikF6RGA8 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
C530025M09RikF6RGA8 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
C530025M09RikF6RGA8 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
C530025M09RikF6RGA8 Gm4780-202ENSMUST00000215200 2644 ntBASIC9.39□□□□□ -0.91
C530025M09RikF6RGA8 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
C530025M09RikF6RGA8 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC9.39□□□□□ -0.91
C530025M09RikF6RGA8 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
C530025M09RikF6RGA8 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
C530025M09RikF6RGA8 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
C530025M09RikF6RGA8 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
C530025M09RikF6RGA8 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC9.39□□□□□ -0.91
C530025M09RikF6RGA8 Gm11405-201ENSMUST00000118689 1556 ntBASIC9.39□□□□□ -0.91
C530025M09RikF6RGA8 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
C530025M09RikF6RGA8 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
C530025M09RikF6RGA8 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
C530025M09RikF6RGA8 Gm9385-201ENSMUST00000117563 472 ntBASIC9.39□□□□□ -0.91
C530025M09RikF6RGA8 Gm13884-201ENSMUST00000118103 829 ntBASIC9.39□□□□□ -0.91
C530025M09RikF6RGA8 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC9.39□□□□□ -0.91
C530025M09RikF6RGA8 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
C530025M09RikF6RGA8 Mir5131-201ENSMUST00000175426 93 ntBASIC9.39□□□□□ -0.91
C530025M09RikF6RGA8 Mir5126-201ENSMUST00000175513 77 ntBASIC9.39□□□□□ -0.91
C530025M09RikF6RGA8 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
C530025M09RikF6RGA8 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
C530025M09RikF6RGA8 Gm5177-201ENSMUST00000183092 997 ntBASIC9.39□□□□□ -0.91
C530025M09RikF6RGA8 Mir8098-201ENSMUST00000184011 137 ntBASIC9.39□□□□□ -0.91
C530025M09RikF6RGA8 Gm27301-201ENSMUST00000184012 127 ntBASIC9.39□□□□□ -0.91
C530025M09RikF6RGA8 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC9.39□□□□□ -0.91
C530025M09RikF6RGA8 Gm45747-201ENSMUST00000212203 999 ntBASIC9.39□□□□□ -0.91
C530025M09RikF6RGA8 Thap2-203ENSMUST00000218989 527 ntBASIC9.39□□□□□ -0.91
C530025M09RikF6RGA8 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms