Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ube4aE9Q735 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ube4aE9Q735 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ube4aE9Q735 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC17.07■□□□□ 0.32
Ube4aE9Q735 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC17.07■□□□□ 0.32
Ube4aE9Q735 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC17.07■□□□□ 0.32
Ube4aE9Q735 Gm24420-201ENSMUST00000176676 59 ntBASIC17.07■□□□□ 0.32
Ube4aE9Q735 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC17.07■□□□□ 0.32
Ube4aE9Q735 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Ube4aE9Q735 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC17.07■□□□□ 0.32
Ube4aE9Q735 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Ube4aE9Q735 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ube4aE9Q735 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ube4aE9Q735 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ube4aE9Q735 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Ube4aE9Q735 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ube4aE9Q735 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Ube4aE9Q735 AC121801.1-201ENSMUST00000225363 1899 ntBASIC17.07■□□□□ 0.32
Ube4aE9Q735 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ube4aE9Q735 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ube4aE9Q735 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ube4aE9Q735 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ube4aE9Q735 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ube4aE9Q735 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ube4aE9Q735 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ube4aE9Q735 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Ube4aE9Q735 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ube4aE9Q735 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ube4aE9Q735 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ube4aE9Q735 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ube4aE9Q735 AC115735.4-201ENSMUST00000227460 1944 ntBASIC17.06■□□□□ 0.32
Ube4aE9Q735 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ube4aE9Q735 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Ube4aE9Q735 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ube4aE9Q735 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ube4aE9Q735 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ube4aE9Q735 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ube4aE9Q735 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ube4aE9Q735 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ube4aE9Q735 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC17.06■□□□□ 0.32
Ube4aE9Q735 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC17.06■□□□□ 0.32
Ube4aE9Q735 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC17.06■□□□□ 0.32
Ube4aE9Q735 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ube4aE9Q735 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Ube4aE9Q735 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ube4aE9Q735 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ube4aE9Q735 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ube4aE9Q735 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ube4aE9Q735 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ube4aE9Q735 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ube4aE9Q735 AC159196.2-201ENSMUST00000224082 1622 ntBASIC17.06■□□□□ 0.32
Ube4aE9Q735 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ube4aE9Q735 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Ube4aE9Q735 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ube4aE9Q735 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ube4aE9Q735 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ube4aE9Q735 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ube4aE9Q735 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ube4aE9Q735 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Ube4aE9Q735 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ube4aE9Q735 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ube4aE9Q735 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ube4aE9Q735 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ube4aE9Q735 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ube4aE9Q735 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ube4aE9Q735 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Ube4aE9Q735 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ube4aE9Q735 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ube4aE9Q735 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Ube4aE9Q735 Gm11524-201ENSMUST00000119349 807 ntBASIC17.05■□□□□ 0.32
Ube4aE9Q735 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ube4aE9Q735 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Ube4aE9Q735 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
Ube4aE9Q735 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Ube4aE9Q735 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ube4aE9Q735 Gm6266-201ENSMUST00000203844 806 ntBASIC17.05■□□□□ 0.32
Ube4aE9Q735 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
Ube4aE9Q735 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ube4aE9Q735 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC17.05■□□□□ 0.32
Ube4aE9Q735 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Ube4aE9Q735 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ube4aE9Q735 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ube4aE9Q735 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ube4aE9Q735 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ube4aE9Q735 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ube4aE9Q735 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ube4aE9Q735 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ube4aE9Q735 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ube4aE9Q735 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ube4aE9Q735 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ube4aE9Q735 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ube4aE9Q735 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Ube4aE9Q735 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ube4aE9Q735 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC17.04■□□□□ 0.32
Ube4aE9Q735 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Ube4aE9Q735 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Ube4aE9Q735 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ube4aE9Q735 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ube4aE9Q735 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ube4aE9Q735 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms