Protein–RNA interactions for Protein: E9Q6B2

Ccdc85c, Coiled-coil domain-containing protein 85C, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85cE9Q6B2 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc85cE9Q6B2 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC17.43■□□□□ 0.38
Ccdc85cE9Q6B2 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc85cE9Q6B2 Gm13369-201ENSMUST00000119442 987 ntBASIC17.43■□□□□ 0.38
Ccdc85cE9Q6B2 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC17.43■□□□□ 0.38
Ccdc85cE9Q6B2 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc85cE9Q6B2 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Ccdc85cE9Q6B2 Gm42550-201ENSMUST00000201553 960 ntBASIC17.43■□□□□ 0.38
Ccdc85cE9Q6B2 Gm18027-201ENSMUST00000218947 619 ntBASIC17.43■□□□□ 0.38
Ccdc85cE9Q6B2 Gm9826-201ENSMUST00000029124 1299 ntBASIC17.43■□□□□ 0.38
Ccdc85cE9Q6B2 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc85cE9Q6B2 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc85cE9Q6B2 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc85cE9Q6B2 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc85cE9Q6B2 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc85cE9Q6B2 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc85cE9Q6B2 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc85cE9Q6B2 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc85cE9Q6B2 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc85cE9Q6B2 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.43■□□□□ 0.38
Ccdc85cE9Q6B2 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc85cE9Q6B2 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc85cE9Q6B2 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.43■□□□□ 0.38
Ccdc85cE9Q6B2 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc85cE9Q6B2 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc85cE9Q6B2 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc85cE9Q6B2 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc85cE9Q6B2 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC17.43■□□□□ 0.38
Ccdc85cE9Q6B2 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc85cE9Q6B2 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc85cE9Q6B2 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc85cE9Q6B2 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc85cE9Q6B2 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc85cE9Q6B2 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc85cE9Q6B2 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
Ccdc85cE9Q6B2 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc85cE9Q6B2 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc85cE9Q6B2 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC17.42■□□□□ 0.38
Ccdc85cE9Q6B2 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Ccdc85cE9Q6B2 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc85cE9Q6B2 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Ccdc85cE9Q6B2 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.42■□□□□ 0.38
Ccdc85cE9Q6B2 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc85cE9Q6B2 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc85cE9Q6B2 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc85cE9Q6B2 Gm14730-201ENSMUST00000122378 1045 ntBASIC17.42■□□□□ 0.38
Ccdc85cE9Q6B2 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC17.42■□□□□ 0.38
Ccdc85cE9Q6B2 Gm24990-201ENSMUST00000157406 323 ntBASIC17.42■□□□□ 0.38
Ccdc85cE9Q6B2 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc85cE9Q6B2 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC17.42■□□□□ 0.38
Ccdc85cE9Q6B2 Gm27772-201ENSMUST00000184900 187 ntBASIC17.42■□□□□ 0.38
Ccdc85cE9Q6B2 Gm7498-201ENSMUST00000203282 1084 ntBASIC17.42■□□□□ 0.38
Ccdc85cE9Q6B2 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc85cE9Q6B2 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc85cE9Q6B2 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc85cE9Q6B2 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc85cE9Q6B2 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc85cE9Q6B2 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Ccdc85cE9Q6B2 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC17.42■□□□□ 0.38
Ccdc85cE9Q6B2 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc85cE9Q6B2 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc85cE9Q6B2 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc85cE9Q6B2 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc85cE9Q6B2 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc85cE9Q6B2 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc85cE9Q6B2 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc85cE9Q6B2 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc85cE9Q6B2 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc85cE9Q6B2 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC17.41■□□□□ 0.38
Ccdc85cE9Q6B2 Gm10710-201ENSMUST00000047876 3971 ntBASIC17.41■□□□□ 0.38
Ccdc85cE9Q6B2 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc85cE9Q6B2 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc85cE9Q6B2 Mir5120-201ENSMUST00000175020 78 ntBASIC17.41■□□□□ 0.38
Ccdc85cE9Q6B2 Gm24420-201ENSMUST00000176676 59 ntBASIC17.41■□□□□ 0.38
Ccdc85cE9Q6B2 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Ccdc85cE9Q6B2 Gm8099-201ENSMUST00000200510 742 ntBASIC17.41■□□□□ 0.38
Ccdc85cE9Q6B2 Gm43947-201ENSMUST00000203019 959 ntBASIC17.41■□□□□ 0.38
Ccdc85cE9Q6B2 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc85cE9Q6B2 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc85cE9Q6B2 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc85cE9Q6B2 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc85cE9Q6B2 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC17.41■□□□□ 0.38
Ccdc85cE9Q6B2 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc85cE9Q6B2 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc85cE9Q6B2 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc85cE9Q6B2 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc85cE9Q6B2 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc85cE9Q6B2 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC17.41■□□□□ 0.38
Ccdc85cE9Q6B2 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc85cE9Q6B2 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc85cE9Q6B2 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc85cE9Q6B2 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc85cE9Q6B2 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc85cE9Q6B2 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc85cE9Q6B2 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
Ccdc85cE9Q6B2 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc85cE9Q6B2 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc85cE9Q6B2 Gm8706-201ENSMUST00000197372 1491 ntBASIC17.4■□□□□ 0.38
Ccdc85cE9Q6B2 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc85cE9Q6B2 Gm12201-201ENSMUST00000120657 1234 ntBASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms