Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 AC090659.2-201ENSMUST00000225378 1186 ntBASIC12.1□□□□□ -0.47
Cpsf4lE9Q2N0 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cpsf4lE9Q2N0 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cpsf4lE9Q2N0 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cpsf4lE9Q2N0 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Cpsf4lE9Q2N0 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cpsf4lE9Q2N0 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC12.1□□□□□ -0.47
Cpsf4lE9Q2N0 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cpsf4lE9Q2N0 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cpsf4lE9Q2N0 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cpsf4lE9Q2N0 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cpsf4lE9Q2N0 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cpsf4lE9Q2N0 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cpsf4lE9Q2N0 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cpsf4lE9Q2N0 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cpsf4lE9Q2N0 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cpsf4lE9Q2N0 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cpsf4lE9Q2N0 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cpsf4lE9Q2N0 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cpsf4lE9Q2N0 Gm45751-201ENSMUST00000210185 1573 ntBASIC12.09□□□□□ -0.47
Cpsf4lE9Q2N0 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cpsf4lE9Q2N0 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC12.09□□□□□ -0.47
Cpsf4lE9Q2N0 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cpsf4lE9Q2N0 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cpsf4lE9Q2N0 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cpsf4lE9Q2N0 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC12.09□□□□□ -0.47
Cpsf4lE9Q2N0 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cpsf4lE9Q2N0 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cpsf4lE9Q2N0 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cpsf4lE9Q2N0 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cpsf4lE9Q2N0 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC12.09□□□□□ -0.47
Cpsf4lE9Q2N0 Gm13616-201ENSMUST00000120600 222 ntBASIC12.09□□□□□ -0.47
Cpsf4lE9Q2N0 Gm22175-201ENSMUST00000175007 78 ntBASIC12.09□□□□□ -0.47
Cpsf4lE9Q2N0 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Cpsf4lE9Q2N0 Gm37277-201ENSMUST00000194052 1111 ntBASIC12.09□□□□□ -0.47
Cpsf4lE9Q2N0 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cpsf4lE9Q2N0 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC12.09□□□□□ -0.47
Cpsf4lE9Q2N0 AC124732.2-201ENSMUST00000221977 316 ntBASIC12.09□□□□□ -0.47
Cpsf4lE9Q2N0 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cpsf4lE9Q2N0 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC12.09□□□□□ -0.47
Cpsf4lE9Q2N0 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Cpsf4lE9Q2N0 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cpsf4lE9Q2N0 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cpsf4lE9Q2N0 Mir125a-201ENSMUST00000083545 68 ntBASIC12.09□□□□□ -0.47
Cpsf4lE9Q2N0 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cpsf4lE9Q2N0 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cpsf4lE9Q2N0 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cpsf4lE9Q2N0 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cpsf4lE9Q2N0 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Cpsf4lE9Q2N0 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cpsf4lE9Q2N0 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cpsf4lE9Q2N0 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cpsf4lE9Q2N0 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cpsf4lE9Q2N0 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cpsf4lE9Q2N0 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cpsf4lE9Q2N0 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Cpsf4lE9Q2N0 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Cpsf4lE9Q2N0 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Cpsf4lE9Q2N0 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Cpsf4lE9Q2N0 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Cpsf4lE9Q2N0 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cpsf4lE9Q2N0 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cpsf4lE9Q2N0 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cpsf4lE9Q2N0 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cpsf4lE9Q2N0 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cpsf4lE9Q2N0 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cpsf4lE9Q2N0 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cpsf4lE9Q2N0 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC12.08□□□□□ -0.48
Cpsf4lE9Q2N0 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cpsf4lE9Q2N0 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cpsf4lE9Q2N0 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cpsf4lE9Q2N0 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cpsf4lE9Q2N0 Gm24543-201ENSMUST00000103867 82 ntBASIC12.08□□□□□ -0.48
Cpsf4lE9Q2N0 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cpsf4lE9Q2N0 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cpsf4lE9Q2N0 Gm15957-201ENSMUST00000118893 974 ntBASIC12.08□□□□□ -0.48
Cpsf4lE9Q2N0 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cpsf4lE9Q2N0 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC12.08□□□□□ -0.48
Cpsf4lE9Q2N0 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cpsf4lE9Q2N0 Gm27430-201ENSMUST00000184585 107 ntBASIC12.08□□□□□ -0.48
Cpsf4lE9Q2N0 Gm44333-201ENSMUST00000197168 107 ntBASIC12.08□□□□□ -0.48
Cpsf4lE9Q2N0 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC12.08□□□□□ -0.48
Cpsf4lE9Q2N0 AC139382.1-201ENSMUST00000221402 498 ntBASIC12.08□□□□□ -0.48
Cpsf4lE9Q2N0 Dupd1-202ENSMUST00000224735 548 ntBASIC12.08□□□□□ -0.48
Cpsf4lE9Q2N0 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cpsf4lE9Q2N0 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cpsf4lE9Q2N0 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cpsf4lE9Q2N0 Gm9109-201ENSMUST00000120254 1405 ntBASIC12.08□□□□□ -0.48
Cpsf4lE9Q2N0 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cpsf4lE9Q2N0 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cpsf4lE9Q2N0 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cpsf4lE9Q2N0 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Cpsf4lE9Q2N0 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cpsf4lE9Q2N0 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cpsf4lE9Q2N0 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Cpsf4lE9Q2N0 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cpsf4lE9Q2N0 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC12.08□□□□□ -0.48
Cpsf4lE9Q2N0 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cpsf4lE9Q2N0 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cpsf4lE9Q2N0 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms