Protein–RNA interactions for Protein: D3Z235

Gm3543, Predicted gene 3543, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3543D3Z235 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm3543D3Z235 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Gm3543D3Z235 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Gm3543D3Z235 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gm3543D3Z235 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gm3543D3Z235 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gm3543D3Z235 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gm3543D3Z235 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gm3543D3Z235 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Gm3543D3Z235 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gm3543D3Z235 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Gm3543D3Z235 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC12.94□□□□□ -0.34
Gm3543D3Z235 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gm3543D3Z235 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC12.94□□□□□ -0.34
Gm3543D3Z235 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Gm3543D3Z235 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Gm3543D3Z235 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC12.94□□□□□ -0.34
Gm3543D3Z235 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Gm3543D3Z235 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC12.94□□□□□ -0.34
Gm3543D3Z235 Gm18049-201ENSMUST00000208909 581 ntBASIC12.94□□□□□ -0.34
Gm3543D3Z235 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC12.94□□□□□ -0.34
Gm3543D3Z235 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gm3543D3Z235 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Gm3543D3Z235 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Gm3543D3Z235 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Gm3543D3Z235 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gm3543D3Z235 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gm3543D3Z235 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gm3543D3Z235 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gm3543D3Z235 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gm3543D3Z235 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gm3543D3Z235 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Gm3543D3Z235 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Gm3543D3Z235 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC12.93□□□□□ -0.34
Gm3543D3Z235 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gm3543D3Z235 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Gm3543D3Z235 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gm3543D3Z235 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gm3543D3Z235 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Gm3543D3Z235 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gm3543D3Z235 Gm13517-201ENSMUST00000120782 1495 ntBASIC12.93□□□□□ -0.34
Gm3543D3Z235 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gm3543D3Z235 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC12.93□□□□□ -0.34
Gm3543D3Z235 Ksr1-207ENSMUST00000226282 5260 ntBASIC12.93□□□□□ -0.34
Gm3543D3Z235 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gm3543D3Z235 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC12.93□□□□□ -0.34
Gm3543D3Z235 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC12.93□□□□□ -0.34
Gm3543D3Z235 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC12.93□□□□□ -0.34
Gm3543D3Z235 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC12.93□□□□□ -0.34
Gm3543D3Z235 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC12.93□□□□□ -0.34
Gm3543D3Z235 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC12.93□□□□□ -0.34
Gm3543D3Z235 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC12.93□□□□□ -0.34
Gm3543D3Z235 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gm3543D3Z235 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gm3543D3Z235 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC12.93□□□□□ -0.34
Gm3543D3Z235 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Gm3543D3Z235 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gm3543D3Z235 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gm3543D3Z235 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gm3543D3Z235 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gm3543D3Z235 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gm3543D3Z235 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gm3543D3Z235 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gm3543D3Z235 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gm3543D3Z235 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gm3543D3Z235 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gm3543D3Z235 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gm3543D3Z235 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Gm3543D3Z235 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Gm3543D3Z235 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Gm3543D3Z235 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Gm3543D3Z235 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Gm3543D3Z235 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Gm3543D3Z235 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Gm3543D3Z235 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Gm3543D3Z235 Gm7336-201ENSMUST00000107041 1232 ntBASIC12.92□□□□□ -0.34
Gm3543D3Z235 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Gm3543D3Z235 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
Gm3543D3Z235 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC12.92□□□□□ -0.34
Gm3543D3Z235 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Gm3543D3Z235 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Gm3543D3Z235 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Gm3543D3Z235 Klk2-ps-201ENSMUST00000205342 571 ntBASIC12.92□□□□□ -0.34
Gm3543D3Z235 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Gm3543D3Z235 Gm5779-201ENSMUST00000218467 910 ntBASIC12.92□□□□□ -0.34
Gm3543D3Z235 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC12.92□□□□□ -0.34
Gm3543D3Z235 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Gm3543D3Z235 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Gm3543D3Z235 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Gm3543D3Z235 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Gm3543D3Z235 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Gm3543D3Z235 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Gm3543D3Z235 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Gm3543D3Z235 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Gm3543D3Z235 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Gm3543D3Z235 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Gm3543D3Z235 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Gm3543D3Z235 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Gm3543D3Z235 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Gm3543D3Z235 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms