Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Mir744-201ENSMUST00000103261 100 ntBASIC7.35□□□□□ -1.23
Ubr4A2AN08 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC7.35□□□□□ -1.23
Ubr4A2AN08 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC7.35□□□□□ -1.23
Ubr4A2AN08 Gm8176-201ENSMUST00000191297 1099 ntBASIC7.35□□□□□ -1.23
Ubr4A2AN08 Gm34312-201ENSMUST00000204650 1092 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Ubr4A2AN08 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC7.35□□□□□ -1.23
Ubr4A2AN08 AC121598.1-201ENSMUST00000228224 1019 ntBASIC7.35□□□□□ -1.23
Ubr4A2AN08 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Ubr4A2AN08 Gm6304-201ENSMUST00000096579 447 ntBASIC7.35□□□□□ -1.23
Ubr4A2AN08 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Ubr4A2AN08 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Ubr4A2AN08 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Ubr4A2AN08 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Ubr4A2AN08 Gm26596-201ENSMUST00000180464 2655 ntBASIC7.35□□□□□ -1.23
Ubr4A2AN08 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
Ubr4A2AN08 Hivep3-201ENSMUST00000084306 2973 ntBASIC7.35□□□□□ -1.23
Ubr4A2AN08 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
Ubr4A2AN08 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Ubr4A2AN08 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Ubr4A2AN08 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC7.35□□□□□ -1.23
Ubr4A2AN08 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
Ubr4A2AN08 Gm13549-201ENSMUST00000118339 796 ntBASIC7.35□□□□□ -1.23
Ubr4A2AN08 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Ubr4A2AN08 Gm26957-201ENSMUST00000182645 977 ntBASIC7.35□□□□□ -1.23
Ubr4A2AN08 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC7.35□□□□□ -1.23
Ubr4A2AN08 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
Ubr4A2AN08 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Ubr4A2AN08 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
Ubr4A2AN08 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC7.35□□□□□ -1.23
Ubr4A2AN08 Gm43195-201ENSMUST00000200614 2332 ntBASIC7.35□□□□□ -1.23
Ubr4A2AN08 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC7.35□□□□□ -1.23
Ubr4A2AN08 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Ubr4A2AN08 Gm43692-201ENSMUST00000198236 1062 ntBASIC7.35□□□□□ -1.23
Ubr4A2AN08 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Ubr4A2AN08 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC7.35□□□□□ -1.23
Ubr4A2AN08 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC7.35□□□□□ -1.23
Ubr4A2AN08 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Ubr4A2AN08 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Ubr4A2AN08 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Ubr4A2AN08 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Ubr4A2AN08 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Ubr4A2AN08 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Ubr4A2AN08 Gm21998-201ENSMUST00000117552 1308 ntBASIC7.34□□□□□ -1.23
Ubr4A2AN08 Gm13700-201ENSMUST00000118624 1128 ntBASIC7.34□□□□□ -1.23
Ubr4A2AN08 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Ubr4A2AN08 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC7.34□□□□□ -1.23
Ubr4A2AN08 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Ubr4A2AN08 Gm9111-201ENSMUST00000219394 709 ntBASIC7.34□□□□□ -1.23
Ubr4A2AN08 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Ubr4A2AN08 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC7.34□□□□□ -1.23
Ubr4A2AN08 Gm12684-201ENSMUST00000118675 999 ntBASIC7.34□□□□□ -1.23
Ubr4A2AN08 Gm14639-201ENSMUST00000120850 866 ntBASIC7.34□□□□□ -1.23
Ubr4A2AN08 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Ubr4A2AN08 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC7.34□□□□□ -1.23
Ubr4A2AN08 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
Ubr4A2AN08 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
Ubr4A2AN08 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Ubr4A2AN08 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Ubr4A2AN08 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
Ubr4A2AN08 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Ubr4A2AN08 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC7.34□□□□□ -1.23
Ubr4A2AN08 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC7.34□□□□□ -1.23
Ubr4A2AN08 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
Ubr4A2AN08 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Ubr4A2AN08 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Ubr4A2AN08 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
Ubr4A2AN08 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
Ubr4A2AN08 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC7.34□□□□□ -1.23
Ubr4A2AN08 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC7.34□□□□□ -1.23
Ubr4A2AN08 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Ubr4A2AN08 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Ubr4A2AN08 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Ubr4A2AN08 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Ubr4A2AN08 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Ubr4A2AN08 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Ubr4A2AN08 Poc1a-209ENSMUST00000216228 1431 ntTSL 5 BASIC7.34□□□□□ -1.23
Ubr4A2AN08 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
Ubr4A2AN08 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
Ubr4A2AN08 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Ubr4A2AN08 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Ubr4A2AN08 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Ubr4A2AN08 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC7.34□□□□□ -1.23
Ubr4A2AN08 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
Ubr4A2AN08 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC7.34□□□□□ -1.23
Ubr4A2AN08 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC7.34□□□□□ -1.23
Ubr4A2AN08 Gm25998-201ENSMUST00000175397 53 ntBASIC7.34□□□□□ -1.23
Ubr4A2AN08 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC7.34□□□□□ -1.23
Ubr4A2AN08 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Ubr4A2AN08 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC7.34□□□□□ -1.23
Ubr4A2AN08 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC7.34□□□□□ -1.23
Ubr4A2AN08 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Ubr4A2AN08 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Ubr4A2AN08 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Ubr4A2AN08 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
Ubr4A2AN08 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
Ubr4A2AN08 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.24
Ubr4A2AN08 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC7.34□□□□□ -1.24
Ubr4A2AN08 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.24
Ubr4A2AN08 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC7.34□□□□□ -1.24
Ubr4A2AN08 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms