Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav12d-1A0N8R0 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav12d-1A0N8R0 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Trav12d-1A0N8R0 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Trav12d-1A0N8R0 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav12d-1A0N8R0 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Trav12d-1A0N8R0 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav12d-1A0N8R0 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav12d-1A0N8R0 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav12d-1A0N8R0 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav12d-1A0N8R0 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Trav12d-1A0N8R0 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav12d-1A0N8R0 Gm27300-201ENSMUST00000184085 97 ntBASIC11.5□□□□□ -0.57
Trav12d-1A0N8R0 Gm27335-201ENSMUST00000184758 97 ntBASIC11.5□□□□□ -0.57
Trav12d-1A0N8R0 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Trav12d-1A0N8R0 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC11.5□□□□□ -0.57
Trav12d-1A0N8R0 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC11.5□□□□□ -0.57
Trav12d-1A0N8R0 AC131690.1-201ENSMUST00000218406 374 ntBASIC11.5□□□□□ -0.57
Trav12d-1A0N8R0 AC158538.1-201ENSMUST00000225870 294 ntBASIC11.5□□□□□ -0.57
Trav12d-1A0N8R0 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav12d-1A0N8R0 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav12d-1A0N8R0 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC11.5□□□□□ -0.57
Trav12d-1A0N8R0 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Trav12d-1A0N8R0 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC11.5□□□□□ -0.57
Trav12d-1A0N8R0 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Trav12d-1A0N8R0 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
Trav12d-1A0N8R0 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav12d-1A0N8R0 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC11.5□□□□□ -0.57
Trav12d-1A0N8R0 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav12d-1A0N8R0 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav12d-1A0N8R0 Gm30238-201ENSMUST00000195528 2603 ntBASIC11.5□□□□□ -0.57
Trav12d-1A0N8R0 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav12d-1A0N8R0 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav12d-1A0N8R0 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav12d-1A0N8R0 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav12d-1A0N8R0 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav12d-1A0N8R0 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC11.5□□□□□ -0.57
Trav12d-1A0N8R0 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav12d-1A0N8R0 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav12d-1A0N8R0 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav12d-1A0N8R0 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
Trav12d-1A0N8R0 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
Trav12d-1A0N8R0 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav12d-1A0N8R0 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav12d-1A0N8R0 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Trav12d-1A0N8R0 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav12d-1A0N8R0 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav12d-1A0N8R0 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC11.49□□□□□ -0.57
Trav12d-1A0N8R0 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav12d-1A0N8R0 Gm6198-201ENSMUST00000191337 2929 ntBASIC11.49□□□□□ -0.57
Trav12d-1A0N8R0 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Trav12d-1A0N8R0 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Trav12d-1A0N8R0 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Trav12d-1A0N8R0 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav12d-1A0N8R0 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
Trav12d-1A0N8R0 Gm13036-201ENSMUST00000117799 748 ntBASIC11.49□□□□□ -0.57
Trav12d-1A0N8R0 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC11.49□□□□□ -0.57
Trav12d-1A0N8R0 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav12d-1A0N8R0 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Trav12d-1A0N8R0 Gm10275-202ENSMUST00000168697 495 ntBASIC11.49□□□□□ -0.57
Trav12d-1A0N8R0 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC11.49□□□□□ -0.57
Trav12d-1A0N8R0 Gm10060-201ENSMUST00000212002 111 ntBASIC11.49□□□□□ -0.57
Trav12d-1A0N8R0 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav12d-1A0N8R0 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav12d-1A0N8R0 Gm10275-201ENSMUST00000092620 635 ntBASIC11.49□□□□□ -0.57
Trav12d-1A0N8R0 Gm11873-201ENSMUST00000117877 1304 ntBASIC11.49□□□□□ -0.57
Trav12d-1A0N8R0 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav12d-1A0N8R0 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav12d-1A0N8R0 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav12d-1A0N8R0 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav12d-1A0N8R0 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Trav12d-1A0N8R0 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav12d-1A0N8R0 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav12d-1A0N8R0 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav12d-1A0N8R0 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav12d-1A0N8R0 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav12d-1A0N8R0 AC121801.1-201ENSMUST00000225363 1899 ntBASIC11.49□□□□□ -0.57
Trav12d-1A0N8R0 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav12d-1A0N8R0 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav12d-1A0N8R0 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav12d-1A0N8R0 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC11.48□□□□□ -0.57
Trav12d-1A0N8R0 Gm38197-201ENSMUST00000192320 2122 ntBASIC11.48□□□□□ -0.57
Trav12d-1A0N8R0 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Trav12d-1A0N8R0 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav12d-1A0N8R0 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav12d-1A0N8R0 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav12d-1A0N8R0 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Trav12d-1A0N8R0 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Trav12d-1A0N8R0 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav12d-1A0N8R0 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav12d-1A0N8R0 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav12d-1A0N8R0 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav12d-1A0N8R0 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav12d-1A0N8R0 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC11.48□□□□□ -0.57
Trav12d-1A0N8R0 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC11.48□□□□□ -0.57
Trav12d-1A0N8R0 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC11.48□□□□□ -0.57
Trav12d-1A0N8R0 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav12d-1A0N8R0 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav12d-1A0N8R0 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav12d-1A0N8R0 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms