Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc112A0AUP1 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc112A0AUP1 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
Ccdc112A0AUP1 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc112A0AUP1 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc112A0AUP1 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc112A0AUP1 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc112A0AUP1 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Ccdc112A0AUP1 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc112A0AUP1 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc112A0AUP1 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Ccdc112A0AUP1 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc112A0AUP1 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc112A0AUP1 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc112A0AUP1 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC16.3■□□□□ 0.2
Ccdc112A0AUP1 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc112A0AUP1 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
Ccdc112A0AUP1 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc112A0AUP1 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc112A0AUP1 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Ccdc112A0AUP1 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Ccdc112A0AUP1 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC16.3■□□□□ 0.2
Ccdc112A0AUP1 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc112A0AUP1 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc112A0AUP1 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc112A0AUP1 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc112A0AUP1 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc112A0AUP1 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC16.3■□□□□ 0.2
Ccdc112A0AUP1 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC16.3■□□□□ 0.2
Ccdc112A0AUP1 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Ccdc112A0AUP1 CT030684.1-201ENSMUST00000227292 914 ntBASIC16.3■□□□□ 0.2
Ccdc112A0AUP1 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc112A0AUP1 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc112A0AUP1 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Ccdc112A0AUP1 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc112A0AUP1 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Ccdc112A0AUP1 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc112A0AUP1 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc112A0AUP1 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc112A0AUP1 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
Ccdc112A0AUP1 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc112A0AUP1 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc112A0AUP1 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc112A0AUP1 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Ccdc112A0AUP1 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Ccdc112A0AUP1 CT025610.1-201ENSMUST00000224552 1786 ntBASIC16.29■□□□□ 0.2
Ccdc112A0AUP1 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc112A0AUP1 Gm44492-201ENSMUST00000197012 141 ntBASIC16.29■□□□□ 0.2
Ccdc112A0AUP1 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc112A0AUP1 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Ccdc112A0AUP1 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC16.29■□□□□ 0.2
Ccdc112A0AUP1 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc112A0AUP1 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc112A0AUP1 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc112A0AUP1 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc112A0AUP1 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc112A0AUP1 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC16.28■□□□□ 0.2
Ccdc112A0AUP1 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Ccdc112A0AUP1 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc112A0AUP1 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc112A0AUP1 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc112A0AUP1 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc112A0AUP1 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC16.28■□□□□ 0.2
Ccdc112A0AUP1 Gm43332-201ENSMUST00000202511 1044 ntBASIC16.28■□□□□ 0.2
Ccdc112A0AUP1 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC16.28■□□□□ 0.2
Ccdc112A0AUP1 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc112A0AUP1 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC16.28■□□□□ 0.2
Ccdc112A0AUP1 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc112A0AUP1 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
Ccdc112A0AUP1 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc112A0AUP1 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc112A0AUP1 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc112A0AUP1 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC16.28■□□□□ 0.2
Ccdc112A0AUP1 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
Ccdc112A0AUP1 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc112A0AUP1 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc112A0AUP1 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc112A0AUP1 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc112A0AUP1 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc112A0AUP1 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Ccdc112A0AUP1 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc112A0AUP1 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc112A0AUP1 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Ccdc112A0AUP1 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc112A0AUP1 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Ccdc112A0AUP1 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc112A0AUP1 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc112A0AUP1 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc112A0AUP1 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc112A0AUP1 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc112A0AUP1 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc112A0AUP1 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc112A0AUP1 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc112A0AUP1 Gm9727-201ENSMUST00000161387 555 ntBASIC16.27■□□□□ 0.2
Ccdc112A0AUP1 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC16.27■□□□□ 0.2
Ccdc112A0AUP1 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc112A0AUP1 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC16.27■□□□□ 0.2
Ccdc112A0AUP1 Mzt1-203ENSMUST00000227948 952 ntBASIC16.27■□□□□ 0.2
Ccdc112A0AUP1 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc112A0AUP1 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms