Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Gm8318-201ENSMUST00000182954 872 ntBASIC10.84□□□□□ -0.67
Trav3n-3A0A0G2JEM0 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC10.84□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC10.84□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3n-3A0A0G2JEM0 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC10.84□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3n-3A0A0G2JEM0 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC10.83□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC10.83□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3n-3A0A0G2JEM0 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Trav3n-3A0A0G2JEM0 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC10.83□□□□□ -0.68
Trav3n-3A0A0G2JEM0 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC10.83□□□□□ -0.68
Trav3n-3A0A0G2JEM0 CT009510.1-201ENSMUST00000227972 270 ntBASIC10.83□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3n-3A0A0G2JEM0 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC10.83□□□□□ -0.68
Trav3n-3A0A0G2JEM0 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC10.83□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Gm7049-201ENSMUST00000223520 1712 ntBASIC10.83□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3n-3A0A0G2JEM0 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Gm8242-201ENSMUST00000193029 1420 ntBASIC10.83□□□□□ -0.68
Trav3n-3A0A0G2JEM0 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC10.82□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC10.82□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Celf4-206ENSMUST00000224553 1729 ntBASIC10.82□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC10.82□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC10.82□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Gm25927-201ENSMUST00000175058 117 ntBASIC10.82□□□□□ -0.68
Trav3n-3A0A0G2JEM0 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Trav3n-3A0A0G2JEM0 AC093926.2-201ENSMUST00000214468 1228 ntBASIC10.82□□□□□ -0.68
Trav3n-3A0A0G2JEM0 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms