Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Gm4913-201ENSMUST00000117075 1290 ntBASIC10.41□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Gm6973-201ENSMUST00000117080 721 ntBASIC10.41□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Gm11543-201ENSMUST00000120758 370 ntBASIC10.41□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC10.41□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Gm43514-201ENSMUST00000198852 424 ntBASIC10.41□□□□□ -0.74
Trav9n-2A0A0G2JDP3 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC10.41□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Gm14451-201ENSMUST00000121581 1542 ntBASIC10.41□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Gm14042-201ENSMUST00000120139 833 ntBASIC10.4□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC10.4□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC10.4□□□□□ -0.74
Trav9n-2A0A0G2JDP3 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC10.4□□□□□ -0.74
Trav9n-2A0A0G2JDP3 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC10.4□□□□□ -0.74
Trav9n-2A0A0G2JDP3 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC10.4□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC10.4□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Gm20553-201ENSMUST00000204205 844 ntBASIC10.4□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Gpr146-202ENSMUST00000053120 1040 ntBASIC10.4□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Gm10175-201ENSMUST00000086013 645 ntBASIC10.4□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav9n-2A0A0G2JDP3 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Trav9n-2A0A0G2JDP3 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Trav9n-2A0A0G2JDP3 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC10.39□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC10.39□□□□□ -0.75
Trav9n-2A0A0G2JDP3 H2af-ps-201ENSMUST00000119066 295 ntBASIC10.39□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC10.39□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Gm11594-201ENSMUST00000122313 162 ntBASIC10.39□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Gm12017-201ENSMUST00000122453 1003 ntBASIC10.39□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav9n-2A0A0G2JDP3 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC10.39□□□□□ -0.75
Trav9n-2A0A0G2JDP3 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC10.39□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav9n-2A0A0G2JDP3 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC10.39□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms