Protein–RNA interactions for Protein: Q9Z1B8

Phf1, PHD finger protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phf1Q9Z1B8 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Phf1Q9Z1B8 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.2□□□□□ -0.3
Phf1Q9Z1B8 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Phf1Q9Z1B8 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Phf1Q9Z1B8 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC13.2□□□□□ -0.3
Phf1Q9Z1B8 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Phf1Q9Z1B8 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Phf1Q9Z1B8 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Phf1Q9Z1B8 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Phf1Q9Z1B8 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Phf1Q9Z1B8 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Phf1Q9Z1B8 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Phf1Q9Z1B8 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC13.19□□□□□ -0.3
Phf1Q9Z1B8 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Phf1Q9Z1B8 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Phf1Q9Z1B8 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Phf1Q9Z1B8 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Phf1Q9Z1B8 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Phf1Q9Z1B8 Gm13223-201ENSMUST00000118609 747 ntBASIC13.19□□□□□ -0.3
Phf1Q9Z1B8 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Phf1Q9Z1B8 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Phf1Q9Z1B8 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC13.19□□□□□ -0.3
Phf1Q9Z1B8 Gm38294-201ENSMUST00000192831 381 ntBASIC13.19□□□□□ -0.3
Phf1Q9Z1B8 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC13.19□□□□□ -0.3
Phf1Q9Z1B8 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Phf1Q9Z1B8 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Phf1Q9Z1B8 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Phf1Q9Z1B8 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Phf1Q9Z1B8 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Phf1Q9Z1B8 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Phf1Q9Z1B8 Tcf21-202ENSMUST00000218002 1788 ntBASIC13.19□□□□□ -0.3
Phf1Q9Z1B8 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Phf1Q9Z1B8 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Phf1Q9Z1B8 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Phf1Q9Z1B8 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Phf1Q9Z1B8 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Phf1Q9Z1B8 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC13.19□□□□□ -0.3
Phf1Q9Z1B8 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Phf1Q9Z1B8 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Phf1Q9Z1B8 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Phf1Q9Z1B8 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC13.18□□□□□ -0.3
Phf1Q9Z1B8 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Phf1Q9Z1B8 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Phf1Q9Z1B8 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Phf1Q9Z1B8 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Phf1Q9Z1B8 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Phf1Q9Z1B8 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Phf1Q9Z1B8 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Phf1Q9Z1B8 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Phf1Q9Z1B8 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Phf1Q9Z1B8 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Phf1Q9Z1B8 AC159621.2-201ENSMUST00000223519 1326 ntBASIC13.18□□□□□ -0.3
Phf1Q9Z1B8 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Phf1Q9Z1B8 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.18□□□□□ -0.3
Phf1Q9Z1B8 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Phf1Q9Z1B8 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Phf1Q9Z1B8 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Phf1Q9Z1B8 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Phf1Q9Z1B8 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Phf1Q9Z1B8 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Phf1Q9Z1B8 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Phf1Q9Z1B8 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Phf1Q9Z1B8 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC13.18□□□□□ -0.3
Phf1Q9Z1B8 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC13.18□□□□□ -0.3
Phf1Q9Z1B8 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Phf1Q9Z1B8 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC13.18□□□□□ -0.3
Phf1Q9Z1B8 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Phf1Q9Z1B8 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC13.18□□□□□ -0.3
Phf1Q9Z1B8 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Phf1Q9Z1B8 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC13.18□□□□□ -0.3
Phf1Q9Z1B8 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Phf1Q9Z1B8 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.18□□□□□ -0.3
Phf1Q9Z1B8 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Phf1Q9Z1B8 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Phf1Q9Z1B8 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Phf1Q9Z1B8 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Phf1Q9Z1B8 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Phf1Q9Z1B8 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Phf1Q9Z1B8 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Phf1Q9Z1B8 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Phf1Q9Z1B8 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Phf1Q9Z1B8 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Phf1Q9Z1B8 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Phf1Q9Z1B8 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Phf1Q9Z1B8 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Phf1Q9Z1B8 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.18□□□□□ -0.3
Phf1Q9Z1B8 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Phf1Q9Z1B8 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Phf1Q9Z1B8 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Phf1Q9Z1B8 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Phf1Q9Z1B8 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Phf1Q9Z1B8 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Phf1Q9Z1B8 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Phf1Q9Z1B8 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Phf1Q9Z1B8 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Phf1Q9Z1B8 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Phf1Q9Z1B8 Gm5479-201ENSMUST00000160578 435 ntBASIC13.17□□□□□ -0.3
Phf1Q9Z1B8 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Phf1Q9Z1B8 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Phf1Q9Z1B8 Gm18049-201ENSMUST00000208909 581 ntBASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms