Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
CcsQ9WU84 Gm5049-201ENSMUST00000195878 1590 ntBASIC11.15□□□□□ -0.62
CcsQ9WU84 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
CcsQ9WU84 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
CcsQ9WU84 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
CcsQ9WU84 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC11.15□□□□□ -0.63
CcsQ9WU84 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
CcsQ9WU84 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC11.15□□□□□ -0.63
CcsQ9WU84 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CcsQ9WU84 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CcsQ9WU84 Gm43195-201ENSMUST00000200614 2332 ntBASIC11.14□□□□□ -0.63
CcsQ9WU84 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
CcsQ9WU84 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC11.14□□□□□ -0.63
CcsQ9WU84 Ssr1-204ENSMUST00000225319 1610 ntBASIC11.14□□□□□ -0.63
CcsQ9WU84 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
CcsQ9WU84 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
CcsQ9WU84 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CcsQ9WU84 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CcsQ9WU84 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CcsQ9WU84 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CcsQ9WU84 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
CcsQ9WU84 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
CcsQ9WU84 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC11.14□□□□□ -0.63
CcsQ9WU84 Gm30437-201ENSMUST00000206086 1201 ntBASIC11.14□□□□□ -0.63
CcsQ9WU84 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC11.14□□□□□ -0.63
CcsQ9WU84 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
CcsQ9WU84 Gm8655-201ENSMUST00000221159 852 ntBASIC11.14□□□□□ -0.63
CcsQ9WU84 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CcsQ9WU84 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CcsQ9WU84 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC11.14□□□□□ -0.63
CcsQ9WU84 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CcsQ9WU84 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC11.14□□□□□ -0.63
CcsQ9WU84 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
CcsQ9WU84 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC11.14□□□□□ -0.63
CcsQ9WU84 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC11.14□□□□□ -0.63
CcsQ9WU84 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CcsQ9WU84 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC11.14□□□□□ -0.63
CcsQ9WU84 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC11.14□□□□□ -0.63
CcsQ9WU84 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CcsQ9WU84 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CcsQ9WU84 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CcsQ9WU84 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC11.14□□□□□ -0.63
CcsQ9WU84 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CcsQ9WU84 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CcsQ9WU84 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
CcsQ9WU84 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CcsQ9WU84 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
CcsQ9WU84 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
CcsQ9WU84 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CcsQ9WU84 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CcsQ9WU84 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
CcsQ9WU84 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
CcsQ9WU84 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC11.13□□□□□ -0.63
CcsQ9WU84 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CcsQ9WU84 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
CcsQ9WU84 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC11.13□□□□□ -0.63
CcsQ9WU84 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
CcsQ9WU84 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CcsQ9WU84 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CcsQ9WU84 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
CcsQ9WU84 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC11.13□□□□□ -0.63
CcsQ9WU84 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CcsQ9WU84 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
CcsQ9WU84 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
CcsQ9WU84 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
CcsQ9WU84 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
CcsQ9WU84 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
CcsQ9WU84 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC11.13□□□□□ -0.63
CcsQ9WU84 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC11.13□□□□□ -0.63
CcsQ9WU84 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
CcsQ9WU84 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
CcsQ9WU84 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
CcsQ9WU84 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CcsQ9WU84 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
CcsQ9WU84 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
CcsQ9WU84 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CcsQ9WU84 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CcsQ9WU84 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC11.13□□□□□ -0.63
CcsQ9WU84 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
CcsQ9WU84 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CcsQ9WU84 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
CcsQ9WU84 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
CcsQ9WU84 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
CcsQ9WU84 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
CcsQ9WU84 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
CcsQ9WU84 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CcsQ9WU84 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CcsQ9WU84 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CcsQ9WU84 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC11.12□□□□□ -0.63
CcsQ9WU84 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CcsQ9WU84 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
CcsQ9WU84 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
CcsQ9WU84 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
CcsQ9WU84 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CcsQ9WU84 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CcsQ9WU84 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CcsQ9WU84 Gm44645-201ENSMUST00000205492 1653 ntBASIC11.12□□□□□ -0.63
CcsQ9WU84 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
CcsQ9WU84 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
CcsQ9WU84 Gm25990-201ENSMUST00000102440 86 ntBASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms