Protein–RNA interactions for Protein: Q9R049

Amfr, E3 ubiquitin-protein ligase AMFR, mousemouse

Predictions only

Length 643 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AmfrQ9R049 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
AmfrQ9R049 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC16.03■□□□□ 0.16
AmfrQ9R049 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
AmfrQ9R049 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
AmfrQ9R049 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
AmfrQ9R049 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
AmfrQ9R049 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
AmfrQ9R049 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
AmfrQ9R049 Gm44291-201ENSMUST00000203102 2865 ntBASIC16.03■□□□□ 0.16
AmfrQ9R049 CT025626.1-201ENSMUST00000223735 1455 ntBASIC16.03■□□□□ 0.16
AmfrQ9R049 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
AmfrQ9R049 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
AmfrQ9R049 Tcf21-202ENSMUST00000218002 1788 ntBASIC16.03■□□□□ 0.16
AmfrQ9R049 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
AmfrQ9R049 Gm38391-201ENSMUST00000191720 4069 ntBASIC16.02■□□□□ 0.16
AmfrQ9R049 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
AmfrQ9R049 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
AmfrQ9R049 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
AmfrQ9R049 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
AmfrQ9R049 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
AmfrQ9R049 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC16.02■□□□□ 0.16
AmfrQ9R049 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
AmfrQ9R049 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC16.02■□□□□ 0.16
AmfrQ9R049 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC16.02■□□□□ 0.16
AmfrQ9R049 Gm15483-201ENSMUST00000120338 456 ntBASIC16.02■□□□□ 0.16
AmfrQ9R049 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
AmfrQ9R049 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
AmfrQ9R049 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.16
AmfrQ9R049 AC166341.4-201ENSMUST00000220625 123 ntBASIC16.02■□□□□ 0.16
AmfrQ9R049 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC16.02■□□□□ 0.16
AmfrQ9R049 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
AmfrQ9R049 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
AmfrQ9R049 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
AmfrQ9R049 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC16.02■□□□□ 0.16
AmfrQ9R049 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
AmfrQ9R049 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
AmfrQ9R049 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.15
AmfrQ9R049 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
AmfrQ9R049 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
AmfrQ9R049 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
AmfrQ9R049 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
AmfrQ9R049 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
AmfrQ9R049 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
AmfrQ9R049 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
AmfrQ9R049 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC16.01■□□□□ 0.15
AmfrQ9R049 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
AmfrQ9R049 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
AmfrQ9R049 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
AmfrQ9R049 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
AmfrQ9R049 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC16.01■□□□□ 0.15
AmfrQ9R049 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
AmfrQ9R049 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
AmfrQ9R049 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
AmfrQ9R049 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC16.01■□□□□ 0.15
AmfrQ9R049 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
AmfrQ9R049 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
AmfrQ9R049 Gm22065-201ENSMUST00000103753 110 ntBASIC16.01■□□□□ 0.15
AmfrQ9R049 Gm22066-201ENSMUST00000103761 110 ntBASIC16.01■□□□□ 0.15
AmfrQ9R049 Gm24932-201ENSMUST00000103763 110 ntBASIC16.01■□□□□ 0.15
AmfrQ9R049 Gm24115-201ENSMUST00000103799 110 ntBASIC16.01■□□□□ 0.15
AmfrQ9R049 Gm22190-201ENSMUST00000103827 110 ntBASIC16.01■□□□□ 0.15
AmfrQ9R049 Gm22191-201ENSMUST00000103831 110 ntBASIC16.01■□□□□ 0.15
AmfrQ9R049 Gm24721-201ENSMUST00000103849 110 ntBASIC16.01■□□□□ 0.15
AmfrQ9R049 Gm28018-201ENSMUST00000103869 110 ntBASIC16.01■□□□□ 0.15
AmfrQ9R049 Gm26399-201ENSMUST00000103937 110 ntBASIC16.01■□□□□ 0.15
AmfrQ9R049 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
AmfrQ9R049 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
AmfrQ9R049 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
AmfrQ9R049 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
AmfrQ9R049 Gm2810-201ENSMUST00000118681 990 ntBASIC16.01■□□□□ 0.15
AmfrQ9R049 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC16.01■□□□□ 0.15
AmfrQ9R049 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC16.01■□□□□ 0.15
AmfrQ9R049 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
AmfrQ9R049 Gm18737-201ENSMUST00000173594 937 ntBASIC16.01■□□□□ 0.15
AmfrQ9R049 Gm25349-201ENSMUST00000177728 110 ntBASIC16.01■□□□□ 0.15
AmfrQ9R049 Gm23616-201ENSMUST00000177797 110 ntBASIC16.01■□□□□ 0.15
AmfrQ9R049 Gm25871-201ENSMUST00000177816 110 ntBASIC16.01■□□□□ 0.15
AmfrQ9R049 Gm24752-201ENSMUST00000178240 110 ntBASIC16.01■□□□□ 0.15
AmfrQ9R049 Gm24496-201ENSMUST00000178287 110 ntBASIC16.01■□□□□ 0.15
AmfrQ9R049 Gm25649-201ENSMUST00000178476 110 ntBASIC16.01■□□□□ 0.15
AmfrQ9R049 Gm25548-201ENSMUST00000178681 110 ntBASIC16.01■□□□□ 0.15
AmfrQ9R049 Gm23147-201ENSMUST00000178841 110 ntBASIC16.01■□□□□ 0.15
AmfrQ9R049 Gm26095-201ENSMUST00000179270 110 ntBASIC16.01■□□□□ 0.15
AmfrQ9R049 Gm22171-201ENSMUST00000179283 110 ntBASIC16.01■□□□□ 0.15
AmfrQ9R049 Gm23936-201ENSMUST00000179354 110 ntBASIC16.01■□□□□ 0.15
AmfrQ9R049 Gm22619-201ENSMUST00000179516 110 ntBASIC16.01■□□□□ 0.15
AmfrQ9R049 Gm25255-201ENSMUST00000179579 110 ntBASIC16.01■□□□□ 0.15
AmfrQ9R049 Gm24755-201ENSMUST00000179691 110 ntBASIC16.01■□□□□ 0.15
AmfrQ9R049 Gm26506-201ENSMUST00000179692 110 ntBASIC16.01■□□□□ 0.15
AmfrQ9R049 Gm25086-201ENSMUST00000179931 110 ntBASIC16.01■□□□□ 0.15
AmfrQ9R049 Gm23243-201ENSMUST00000180047 110 ntBASIC16.01■□□□□ 0.15
AmfrQ9R049 Gm24659-201ENSMUST00000180212 110 ntBASIC16.01■□□□□ 0.15
AmfrQ9R049 Gm24169-201ENSMUST00000180244 110 ntBASIC16.01■□□□□ 0.15
AmfrQ9R049 Gm23689-201ENSMUST00000180354 110 ntBASIC16.01■□□□□ 0.15
AmfrQ9R049 Gm27359-201ENSMUST00000184153 110 ntBASIC16.01■□□□□ 0.15
AmfrQ9R049 Gm27785-201ENSMUST00000184268 110 ntBASIC16.01■□□□□ 0.15
AmfrQ9R049 Gm27466-201ENSMUST00000184396 110 ntBASIC16.01■□□□□ 0.15
AmfrQ9R049 Gm27703-201ENSMUST00000184836 110 ntBASIC16.01■□□□□ 0.15
AmfrQ9R049 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
AmfrQ9R049 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms