Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Col4a4Q9QZR9 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col4a4Q9QZR9 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col4a4Q9QZR9 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col4a4Q9QZR9 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col4a4Q9QZR9 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col4a4Q9QZR9 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Col4a4Q9QZR9 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col4a4Q9QZR9 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col4a4Q9QZR9 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col4a4Q9QZR9 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Col4a4Q9QZR9 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Col4a4Q9QZR9 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Col4a4Q9QZR9 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC14□□□□□ -0.17
Col4a4Q9QZR9 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col4a4Q9QZR9 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col4a4Q9QZR9 Abhd11os-203ENSMUST00000222613 363 ntBASIC14□□□□□ -0.17
Col4a4Q9QZR9 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col4a4Q9QZR9 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col4a4Q9QZR9 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col4a4Q9QZR9 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col4a4Q9QZR9 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col4a4Q9QZR9 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Col4a4Q9QZR9 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Col4a4Q9QZR9 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col4a4Q9QZR9 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col4a4Q9QZR9 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col4a4Q9QZR9 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col4a4Q9QZR9 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col4a4Q9QZR9 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
Col4a4Q9QZR9 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Col4a4Q9QZR9 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col4a4Q9QZR9 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Col4a4Q9QZR9 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
Col4a4Q9QZR9 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col4a4Q9QZR9 Gm14028-201ENSMUST00000117434 479 ntBASIC13.99□□□□□ -0.17
Col4a4Q9QZR9 Gm7857-201ENSMUST00000117957 358 ntBASIC13.99□□□□□ -0.17
Col4a4Q9QZR9 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Col4a4Q9QZR9 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Col4a4Q9QZR9 Gm5896-201ENSMUST00000189662 1024 ntBASIC13.99□□□□□ -0.17
Col4a4Q9QZR9 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col4a4Q9QZR9 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Col4a4Q9QZR9 Abhd6-203ENSMUST00000225234 1958 ntBASIC13.99□□□□□ -0.17
Col4a4Q9QZR9 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Col4a4Q9QZR9 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col4a4Q9QZR9 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col4a4Q9QZR9 Gm14451-201ENSMUST00000121581 1542 ntBASIC13.99□□□□□ -0.17
Col4a4Q9QZR9 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col4a4Q9QZR9 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col4a4Q9QZR9 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Col4a4Q9QZR9 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col4a4Q9QZR9 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col4a4Q9QZR9 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Col4a4Q9QZR9 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC13.99□□□□□ -0.17
Col4a4Q9QZR9 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC13.98□□□□□ -0.17
Col4a4Q9QZR9 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col4a4Q9QZR9 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC13.98□□□□□ -0.17
Col4a4Q9QZR9 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Col4a4Q9QZR9 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Col4a4Q9QZR9 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC13.98□□□□□ -0.17
Col4a4Q9QZR9 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC13.98□□□□□ -0.17
Col4a4Q9QZR9 Gm37986-201ENSMUST00000193285 383 ntBASIC13.98□□□□□ -0.17
Col4a4Q9QZR9 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col4a4Q9QZR9 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Col4a4Q9QZR9 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
Col4a4Q9QZR9 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col4a4Q9QZR9 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col4a4Q9QZR9 Gm16372-201ENSMUST00000073088 450 ntBASIC13.98□□□□□ -0.17
Col4a4Q9QZR9 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Col4a4Q9QZR9 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13.98□□□□□ -0.17
Col4a4Q9QZR9 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col4a4Q9QZR9 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col4a4Q9QZR9 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col4a4Q9QZR9 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col4a4Q9QZR9 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC13.98□□□□□ -0.17
Col4a4Q9QZR9 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Col4a4Q9QZR9 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col4a4Q9QZR9 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col4a4Q9QZR9 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Col4a4Q9QZR9 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col4a4Q9QZR9 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col4a4Q9QZR9 AC093043.3-201ENSMUST00000226531 2273 ntBASIC13.98□□□□□ -0.17
Col4a4Q9QZR9 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col4a4Q9QZR9 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col4a4Q9QZR9 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC13.98□□□□□ -0.17
Col4a4Q9QZR9 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col4a4Q9QZR9 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col4a4Q9QZR9 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Col4a4Q9QZR9 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC13.98□□□□□ -0.17
Col4a4Q9QZR9 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Col4a4Q9QZR9 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC13.98□□□□□ -0.17
Col4a4Q9QZR9 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Col4a4Q9QZR9 Mir7032-201ENSMUST00000185154 79 ntBASIC13.98□□□□□ -0.17
Col4a4Q9QZR9 BC037039-201ENSMUST00000192003 2205 ntBASIC13.98□□□□□ -0.17
Col4a4Q9QZR9 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Col4a4Q9QZR9 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC13.98□□□□□ -0.17
Col4a4Q9QZR9 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC13.98□□□□□ -0.17
Col4a4Q9QZR9 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.98□□□□□ -0.17
Col4a4Q9QZR9 Gm5781-201ENSMUST00000219792 443 ntBASIC13.98□□□□□ -0.17
Col4a4Q9QZR9 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms