Protein–RNA interactions for Protein: Q9QZ28

Six6, Homeobox protein SIX6, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six6Q9QZ28 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Six6Q9QZ28 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Six6Q9QZ28 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Six6Q9QZ28 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Six6Q9QZ28 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Six6Q9QZ28 Gm20472-201ENSMUST00000174403 1240 ntBASIC12.11□□□□□ -0.47
Six6Q9QZ28 Gm22697-201ENSMUST00000175194 63 ntBASIC12.11□□□□□ -0.47
Six6Q9QZ28 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
Six6Q9QZ28 Gm7889-201ENSMUST00000185591 958 ntBASIC12.11□□□□□ -0.47
Six6Q9QZ28 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Six6Q9QZ28 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Six6Q9QZ28 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Six6Q9QZ28 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Six6Q9QZ28 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Six6Q9QZ28 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Six6Q9QZ28 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.11□□□□□ -0.47
Six6Q9QZ28 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Six6Q9QZ28 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Six6Q9QZ28 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Six6Q9QZ28 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Six6Q9QZ28 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Six6Q9QZ28 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Six6Q9QZ28 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Six6Q9QZ28 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.11□□□□□ -0.47
Six6Q9QZ28 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Six6Q9QZ28 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC12.1□□□□□ -0.47
Six6Q9QZ28 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Six6Q9QZ28 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Six6Q9QZ28 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Six6Q9QZ28 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Six6Q9QZ28 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
Six6Q9QZ28 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Six6Q9QZ28 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Six6Q9QZ28 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Six6Q9QZ28 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Six6Q9QZ28 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Six6Q9QZ28 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Six6Q9QZ28 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Six6Q9QZ28 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Six6Q9QZ28 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Six6Q9QZ28 Gm13312-201ENSMUST00000119631 718 ntBASIC12.1□□□□□ -0.47
Six6Q9QZ28 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC12.1□□□□□ -0.47
Six6Q9QZ28 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC12.1□□□□□ -0.47
Six6Q9QZ28 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Six6Q9QZ28 AC134329.2-201ENSMUST00000217897 428 ntBASIC12.1□□□□□ -0.47
Six6Q9QZ28 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Six6Q9QZ28 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Six6Q9QZ28 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC12.1□□□□□ -0.47
Six6Q9QZ28 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Six6Q9QZ28 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Six6Q9QZ28 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.1□□□□□ -0.47
Six6Q9QZ28 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Six6Q9QZ28 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Six6Q9QZ28 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Six6Q9QZ28 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Six6Q9QZ28 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Six6Q9QZ28 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Six6Q9QZ28 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Six6Q9QZ28 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Six6Q9QZ28 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Six6Q9QZ28 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Six6Q9QZ28 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Six6Q9QZ28 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Six6Q9QZ28 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC12.09□□□□□ -0.47
Six6Q9QZ28 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Six6Q9QZ28 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Six6Q9QZ28 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Six6Q9QZ28 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Six6Q9QZ28 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Six6Q9QZ28 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Six6Q9QZ28 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC12.09□□□□□ -0.47
Six6Q9QZ28 AC153794.1-201ENSMUST00000169148 126 ntBASIC12.09□□□□□ -0.47
Six6Q9QZ28 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC12.09□□□□□ -0.47
Six6Q9QZ28 AC093926.2-201ENSMUST00000214468 1228 ntBASIC12.09□□□□□ -0.47
Six6Q9QZ28 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC12.09□□□□□ -0.47
Six6Q9QZ28 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Six6Q9QZ28 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Six6Q9QZ28 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Six6Q9QZ28 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Six6Q9QZ28 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Six6Q9QZ28 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Six6Q9QZ28 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Six6Q9QZ28 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Six6Q9QZ28 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC12.09□□□□□ -0.47
Six6Q9QZ28 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.09□□□□□ -0.47
Six6Q9QZ28 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Six6Q9QZ28 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Six6Q9QZ28 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Six6Q9QZ28 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Six6Q9QZ28 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Six6Q9QZ28 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC12.09□□□□□ -0.47
Six6Q9QZ28 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Six6Q9QZ28 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.08□□□□□ -0.48
Six6Q9QZ28 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Six6Q9QZ28 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Six6Q9QZ28 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Six6Q9QZ28 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Six6Q9QZ28 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Six6Q9QZ28 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Six6Q9QZ28 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 110.7 ms