Protein–RNA interactions for Protein: Q9JM99

Prg4, Proteoglycan 4, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prg4Q9JM99 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC13□□□□□ -0.33
Prg4Q9JM99 Gm21470-201ENSMUST00000187680 696 ntBASIC13□□□□□ -0.33
Prg4Q9JM99 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC13□□□□□ -0.33
Prg4Q9JM99 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Prg4Q9JM99 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Prg4Q9JM99 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Prg4Q9JM99 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Prg4Q9JM99 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Prg4Q9JM99 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Prg4Q9JM99 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Prg4Q9JM99 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Prg4Q9JM99 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Prg4Q9JM99 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Prg4Q9JM99 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Prg4Q9JM99 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC12.99□□□□□ -0.33
Prg4Q9JM99 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Prg4Q9JM99 Gm6159-201ENSMUST00000191249 1724 ntBASIC12.99□□□□□ -0.33
Prg4Q9JM99 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Prg4Q9JM99 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Prg4Q9JM99 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Prg4Q9JM99 Gm3365-201ENSMUST00000216296 1480 ntBASIC12.99□□□□□ -0.33
Prg4Q9JM99 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC12.99□□□□□ -0.33
Prg4Q9JM99 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Prg4Q9JM99 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Prg4Q9JM99 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC12.99□□□□□ -0.33
Prg4Q9JM99 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC12.99□□□□□ -0.33
Prg4Q9JM99 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC12.99□□□□□ -0.33
Prg4Q9JM99 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC12.99□□□□□ -0.33
Prg4Q9JM99 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Prg4Q9JM99 Gm29667-201ENSMUST00000190817 490 ntBASIC12.99□□□□□ -0.33
Prg4Q9JM99 Gm37714-201ENSMUST00000194742 342 ntBASIC12.99□□□□□ -0.33
Prg4Q9JM99 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Prg4Q9JM99 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC12.99□□□□□ -0.33
Prg4Q9JM99 Gm7390-201ENSMUST00000212452 1216 ntBASIC12.99□□□□□ -0.33
Prg4Q9JM99 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Prg4Q9JM99 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Prg4Q9JM99 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Prg4Q9JM99 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Prg4Q9JM99 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Prg4Q9JM99 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Prg4Q9JM99 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Prg4Q9JM99 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Prg4Q9JM99 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Prg4Q9JM99 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Prg4Q9JM99 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC12.99□□□□□ -0.33
Prg4Q9JM99 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Prg4Q9JM99 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Prg4Q9JM99 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Prg4Q9JM99 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Prg4Q9JM99 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Prg4Q9JM99 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Prg4Q9JM99 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Prg4Q9JM99 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Prg4Q9JM99 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC12.98□□□□□ -0.33
Prg4Q9JM99 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Prg4Q9JM99 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Prg4Q9JM99 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Prg4Q9JM99 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Prg4Q9JM99 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Prg4Q9JM99 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Prg4Q9JM99 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Prg4Q9JM99 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Prg4Q9JM99 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Prg4Q9JM99 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Prg4Q9JM99 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Prg4Q9JM99 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Prg4Q9JM99 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Prg4Q9JM99 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Prg4Q9JM99 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC12.98□□□□□ -0.33
Prg4Q9JM99 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Prg4Q9JM99 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Prg4Q9JM99 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Prg4Q9JM99 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC12.98□□□□□ -0.33
Prg4Q9JM99 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC12.98□□□□□ -0.33
Prg4Q9JM99 Gm18027-201ENSMUST00000218947 619 ntBASIC12.98□□□□□ -0.33
Prg4Q9JM99 Gm20445-201ENSMUST00000061905 565 ntBASIC12.98□□□□□ -0.33
Prg4Q9JM99 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Prg4Q9JM99 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC12.98□□□□□ -0.33
Prg4Q9JM99 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC12.98□□□□□ -0.33
Prg4Q9JM99 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Prg4Q9JM99 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Prg4Q9JM99 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Prg4Q9JM99 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Prg4Q9JM99 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Prg4Q9JM99 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Prg4Q9JM99 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Prg4Q9JM99 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Prg4Q9JM99 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC12.98□□□□□ -0.33
Prg4Q9JM99 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Prg4Q9JM99 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Prg4Q9JM99 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Prg4Q9JM99 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Prg4Q9JM99 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Prg4Q9JM99 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Prg4Q9JM99 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Prg4Q9JM99 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Prg4Q9JM99 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Prg4Q9JM99 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Prg4Q9JM99 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Prg4Q9JM99 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms