Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sec61a2Q9JLR1 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Sec61a2Q9JLR1 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sec61a2Q9JLR1 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
Sec61a2Q9JLR1 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Sec61a2Q9JLR1 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC12.92□□□□□ -0.34
Sec61a2Q9JLR1 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sec61a2Q9JLR1 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sec61a2Q9JLR1 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sec61a2Q9JLR1 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sec61a2Q9JLR1 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sec61a2Q9JLR1 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sec61a2Q9JLR1 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sec61a2Q9JLR1 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sec61a2Q9JLR1 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sec61a2Q9JLR1 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
Sec61a2Q9JLR1 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sec61a2Q9JLR1 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sec61a2Q9JLR1 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sec61a2Q9JLR1 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sec61a2Q9JLR1 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sec61a2Q9JLR1 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sec61a2Q9JLR1 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sec61a2Q9JLR1 Gm8749-201ENSMUST00000117737 331 ntBASIC12.91□□□□□ -0.34
Sec61a2Q9JLR1 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sec61a2Q9JLR1 Gm6944-201ENSMUST00000182449 1006 ntBASIC12.91□□□□□ -0.34
Sec61a2Q9JLR1 Ndufaf2-202ENSMUST00000223734 556 ntBASIC12.91□□□□□ -0.34
Sec61a2Q9JLR1 AC155252.2-201ENSMUST00000226946 680 ntBASIC12.91□□□□□ -0.34
Sec61a2Q9JLR1 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sec61a2Q9JLR1 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sec61a2Q9JLR1 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sec61a2Q9JLR1 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sec61a2Q9JLR1 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sec61a2Q9JLR1 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sec61a2Q9JLR1 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sec61a2Q9JLR1 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sec61a2Q9JLR1 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sec61a2Q9JLR1 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Sec61a2Q9JLR1 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sec61a2Q9JLR1 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sec61a2Q9JLR1 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sec61a2Q9JLR1 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sec61a2Q9JLR1 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC12.9□□□□□ -0.34
Sec61a2Q9JLR1 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sec61a2Q9JLR1 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Sec61a2Q9JLR1 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sec61a2Q9JLR1 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sec61a2Q9JLR1 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sec61a2Q9JLR1 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Sec61a2Q9JLR1 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sec61a2Q9JLR1 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sec61a2Q9JLR1 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Sec61a2Q9JLR1 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Sec61a2Q9JLR1 Gm6736-201ENSMUST00000166583 948 ntBASIC12.9□□□□□ -0.34
Sec61a2Q9JLR1 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sec61a2Q9JLR1 Rpph1-201ENSMUST00000175096 319 ntBASIC12.9□□□□□ -0.34
Sec61a2Q9JLR1 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC12.9□□□□□ -0.34
Sec61a2Q9JLR1 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC12.9□□□□□ -0.34
Sec61a2Q9JLR1 AC124549.3-201ENSMUST00000225541 367 ntBASIC12.9□□□□□ -0.34
Sec61a2Q9JLR1 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sec61a2Q9JLR1 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sec61a2Q9JLR1 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sec61a2Q9JLR1 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sec61a2Q9JLR1 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC12.9□□□□□ -0.34
Sec61a2Q9JLR1 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC12.9□□□□□ -0.34
Sec61a2Q9JLR1 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sec61a2Q9JLR1 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Sec61a2Q9JLR1 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Sec61a2Q9JLR1 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sec61a2Q9JLR1 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sec61a2Q9JLR1 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sec61a2Q9JLR1 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sec61a2Q9JLR1 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sec61a2Q9JLR1 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.35
Sec61a2Q9JLR1 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC12.9□□□□□ -0.35
Sec61a2Q9JLR1 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sec61a2Q9JLR1 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sec61a2Q9JLR1 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sec61a2Q9JLR1 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sec61a2Q9JLR1 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sec61a2Q9JLR1 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Sec61a2Q9JLR1 Gm13233-201ENSMUST00000118760 1443 ntBASIC12.89□□□□□ -0.35
Sec61a2Q9JLR1 Gm13244-201ENSMUST00000118855 1446 ntBASIC12.89□□□□□ -0.35
Sec61a2Q9JLR1 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sec61a2Q9JLR1 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sec61a2Q9JLR1 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC12.89□□□□□ -0.35
Sec61a2Q9JLR1 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sec61a2Q9JLR1 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sec61a2Q9JLR1 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sec61a2Q9JLR1 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC12.89□□□□□ -0.35
Sec61a2Q9JLR1 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC12.89□□□□□ -0.35
Sec61a2Q9JLR1 Gm23547-201ENSMUST00000158210 271 ntBASIC12.89□□□□□ -0.35
Sec61a2Q9JLR1 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC12.89□□□□□ -0.35
Sec61a2Q9JLR1 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC12.89□□□□□ -0.35
Sec61a2Q9JLR1 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Sec61a2Q9JLR1 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sec61a2Q9JLR1 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Sec61a2Q9JLR1 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sec61a2Q9JLR1 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sec61a2Q9JLR1 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms