Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC16.96■□□□□ 0.3
Ube3bQ9ES34 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Ube3bQ9ES34 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC16.96■□□□□ 0.3
Ube3bQ9ES34 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC16.96■□□□□ 0.3
Ube3bQ9ES34 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Ube3bQ9ES34 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Ube3bQ9ES34 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC16.95■□□□□ 0.3
Ube3bQ9ES34 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ube3bQ9ES34 Gm37411-201ENSMUST00000194180 2282 ntBASIC16.95■□□□□ 0.3
Ube3bQ9ES34 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ube3bQ9ES34 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC16.95■□□□□ 0.3
Ube3bQ9ES34 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Ube3bQ9ES34 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ube3bQ9ES34 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ube3bQ9ES34 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ube3bQ9ES34 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ube3bQ9ES34 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ube3bQ9ES34 Gm18027-201ENSMUST00000218947 619 ntBASIC16.95■□□□□ 0.3
Ube3bQ9ES34 Gm6218-201ENSMUST00000219812 628 ntBASIC16.95■□□□□ 0.3
Ube3bQ9ES34 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ube3bQ9ES34 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ube3bQ9ES34 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ube3bQ9ES34 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ube3bQ9ES34 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Ube3bQ9ES34 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ube3bQ9ES34 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Ube3bQ9ES34 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ube3bQ9ES34 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ube3bQ9ES34 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Ube3bQ9ES34 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Ube3bQ9ES34 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ube3bQ9ES34 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ube3bQ9ES34 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ube3bQ9ES34 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ube3bQ9ES34 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ube3bQ9ES34 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Ube3bQ9ES34 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Ube3bQ9ES34 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ube3bQ9ES34 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC16.94■□□□□ 0.3
Ube3bQ9ES34 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ube3bQ9ES34 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ube3bQ9ES34 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC16.94■□□□□ 0.3
Ube3bQ9ES34 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC16.94■□□□□ 0.3
Ube3bQ9ES34 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC16.94■□□□□ 0.3
Ube3bQ9ES34 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC16.94■□□□□ 0.3
Ube3bQ9ES34 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC16.94■□□□□ 0.3
Ube3bQ9ES34 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Ube3bQ9ES34 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ube3bQ9ES34 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ube3bQ9ES34 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ube3bQ9ES34 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ube3bQ9ES34 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ube3bQ9ES34 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC16.94■□□□□ 0.3
Ube3bQ9ES34 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ube3bQ9ES34 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ube3bQ9ES34 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ube3bQ9ES34 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ube3bQ9ES34 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ube3bQ9ES34 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ube3bQ9ES34 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ube3bQ9ES34 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ube3bQ9ES34 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ube3bQ9ES34 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ube3bQ9ES34 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ube3bQ9ES34 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Ube3bQ9ES34 Gm37297-201ENSMUST00000192974 2384 ntBASIC16.93■□□□□ 0.3
Ube3bQ9ES34 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ube3bQ9ES34 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ube3bQ9ES34 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ube3bQ9ES34 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC16.93■□□□□ 0.3
Ube3bQ9ES34 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ube3bQ9ES34 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ube3bQ9ES34 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC16.93■□□□□ 0.3
Ube3bQ9ES34 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC16.93■□□□□ 0.3
Ube3bQ9ES34 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ube3bQ9ES34 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Ube3bQ9ES34 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ube3bQ9ES34 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ube3bQ9ES34 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ube3bQ9ES34 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ube3bQ9ES34 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ube3bQ9ES34 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Ube3bQ9ES34 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ube3bQ9ES34 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ube3bQ9ES34 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ube3bQ9ES34 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ube3bQ9ES34 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC16.93■□□□□ 0.3
Ube3bQ9ES34 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC16.93■□□□□ 0.3
Ube3bQ9ES34 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ube3bQ9ES34 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ube3bQ9ES34 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ube3bQ9ES34 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC16.92■□□□□ 0.3
Ube3bQ9ES34 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ube3bQ9ES34 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ube3bQ9ES34 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ube3bQ9ES34 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
Ube3bQ9ES34 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ube3bQ9ES34 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ube3bQ9ES34 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC16.92■□□□□ 0.3
Ube3bQ9ES34 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms