Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ube4bQ9ES00 Gm4609-201ENSMUST00000106443 1002 ntBASIC13.76□□□□□ -0.21
Ube4bQ9ES00 Gm5138-201ENSMUST00000113842 1002 ntBASIC13.76□□□□□ -0.21
Ube4bQ9ES00 Gm15191-201ENSMUST00000117933 1000 ntBASIC13.76□□□□□ -0.21
Ube4bQ9ES00 Gm15165-201ENSMUST00000118140 502 ntBASIC13.76□□□□□ -0.21
Ube4bQ9ES00 Gm12182-201ENSMUST00000118655 1008 ntBASIC13.76□□□□□ -0.21
Ube4bQ9ES00 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.76□□□□□ -0.21
Ube4bQ9ES00 Gm15372-201ENSMUST00000120729 834 ntBASIC13.76□□□□□ -0.21
Ube4bQ9ES00 Gm13882-201ENSMUST00000120886 1002 ntBASIC13.76□□□□□ -0.21
Ube4bQ9ES00 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ube4bQ9ES00 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ube4bQ9ES00 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC13.76□□□□□ -0.21
Ube4bQ9ES00 Gm10284-201ENSMUST00000145057 1005 ntBASIC13.76□□□□□ -0.21
Ube4bQ9ES00 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Ube4bQ9ES00 Gm10481-201ENSMUST00000179228 1002 ntBASIC13.76□□□□□ -0.21
Ube4bQ9ES00 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC13.76□□□□□ -0.21
Ube4bQ9ES00 Gm2574-201ENSMUST00000181051 1002 ntBASIC13.76□□□□□ -0.21
Ube4bQ9ES00 Gm3200-201ENSMUST00000181493 1002 ntBASIC13.76□□□□□ -0.21
Ube4bQ9ES00 Gm8825-201ENSMUST00000182565 998 ntBASIC13.76□□□□□ -0.21
Ube4bQ9ES00 Gm4518-201ENSMUST00000182638 718 ntBASIC13.76□□□□□ -0.21
Ube4bQ9ES00 Gm8330-201ENSMUST00000182754 1008 ntBASIC13.76□□□□□ -0.21
Ube4bQ9ES00 Gm4575-201ENSMUST00000182991 1002 ntBASIC13.76□□□□□ -0.21
Ube4bQ9ES00 Gm8709-201ENSMUST00000183230 1012 ntBASIC13.76□□□□□ -0.21
Ube4bQ9ES00 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC13.76□□□□□ -0.21
Ube4bQ9ES00 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC13.76□□□□□ -0.21
Ube4bQ9ES00 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ube4bQ9ES00 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ube4bQ9ES00 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ube4bQ9ES00 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ube4bQ9ES00 Gm10293-201ENSMUST00000076317 1002 ntBASIC13.76□□□□□ -0.21
Ube4bQ9ES00 Gm6316-201ENSMUST00000082064 1020 ntBASIC13.76□□□□□ -0.21
Ube4bQ9ES00 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ube4bQ9ES00 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ube4bQ9ES00 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ube4bQ9ES00 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ube4bQ9ES00 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ube4bQ9ES00 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ube4bQ9ES00 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ube4bQ9ES00 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ube4bQ9ES00 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ube4bQ9ES00 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ube4bQ9ES00 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ube4bQ9ES00 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ube4bQ9ES00 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ube4bQ9ES00 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ube4bQ9ES00 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ube4bQ9ES00 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ube4bQ9ES00 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ube4bQ9ES00 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Ube4bQ9ES00 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Ube4bQ9ES00 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ube4bQ9ES00 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC13.75□□□□□ -0.21
Ube4bQ9ES00 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.75□□□□□ -0.21
Ube4bQ9ES00 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ube4bQ9ES00 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ube4bQ9ES00 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ube4bQ9ES00 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.75□□□□□ -0.21
Ube4bQ9ES00 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
Ube4bQ9ES00 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC13.75□□□□□ -0.21
Ube4bQ9ES00 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC13.75□□□□□ -0.21
Ube4bQ9ES00 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Ube4bQ9ES00 AC108846.1-201ENSMUST00000214531 513 ntBASIC13.75□□□□□ -0.21
Ube4bQ9ES00 AC153889.1-201ENSMUST00000219257 330 ntBASIC13.75□□□□□ -0.21
Ube4bQ9ES00 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ube4bQ9ES00 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ube4bQ9ES00 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ube4bQ9ES00 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ube4bQ9ES00 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ube4bQ9ES00 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Ube4bQ9ES00 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Ube4bQ9ES00 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ube4bQ9ES00 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC13.75□□□□□ -0.21
Ube4bQ9ES00 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ube4bQ9ES00 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ube4bQ9ES00 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Ube4bQ9ES00 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.75□□□□□ -0.21
Ube4bQ9ES00 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ube4bQ9ES00 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ube4bQ9ES00 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ube4bQ9ES00 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ube4bQ9ES00 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Ube4bQ9ES00 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Ube4bQ9ES00 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ube4bQ9ES00 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ube4bQ9ES00 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ube4bQ9ES00 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ube4bQ9ES00 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC13.74□□□□□ -0.21
Ube4bQ9ES00 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
Ube4bQ9ES00 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ube4bQ9ES00 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ube4bQ9ES00 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Ube4bQ9ES00 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC13.74□□□□□ -0.21
Ube4bQ9ES00 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC13.74□□□□□ -0.21
Ube4bQ9ES00 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ube4bQ9ES00 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ube4bQ9ES00 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ube4bQ9ES00 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ube4bQ9ES00 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Ube4bQ9ES00 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC13.74□□□□□ -0.21
Ube4bQ9ES00 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms