Protein–RNA interactions for Protein: Q9D439

Cfap53, Cilia- and flagella-associated protein 53, mousemouse

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap53Q9D439 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cfap53Q9D439 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cfap53Q9D439 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Cfap53Q9D439 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC15.72■□□□□ 0.11
Cfap53Q9D439 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC15.72■□□□□ 0.11
Cfap53Q9D439 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Cfap53Q9D439 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Cfap53Q9D439 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cfap53Q9D439 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cfap53Q9D439 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cfap53Q9D439 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cfap53Q9D439 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cfap53Q9D439 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cfap53Q9D439 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cfap53Q9D439 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cfap53Q9D439 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cfap53Q9D439 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cfap53Q9D439 Nudt18-203ENSMUST00000228768 1578 ntBASIC15.71■□□□□ 0.11
Cfap53Q9D439 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cfap53Q9D439 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Cfap53Q9D439 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cfap53Q9D439 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC15.71■□□□□ 0.11
Cfap53Q9D439 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cfap53Q9D439 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cfap53Q9D439 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Cfap53Q9D439 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC15.71■□□□□ 0.11
Cfap53Q9D439 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Cfap53Q9D439 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Cfap53Q9D439 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Cfap53Q9D439 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cfap53Q9D439 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cfap53Q9D439 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cfap53Q9D439 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cfap53Q9D439 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC15.71■□□□□ 0.11
Cfap53Q9D439 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cfap53Q9D439 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cfap53Q9D439 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cfap53Q9D439 Gm13332-201ENSMUST00000120451 1398 ntBASIC15.71■□□□□ 0.11
Cfap53Q9D439 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cfap53Q9D439 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Cfap53Q9D439 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
Cfap53Q9D439 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.1
Cfap53Q9D439 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Cfap53Q9D439 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC15.71■□□□□ 0.1
Cfap53Q9D439 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
Cfap53Q9D439 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Cfap53Q9D439 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Cfap53Q9D439 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
Cfap53Q9D439 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cfap53Q9D439 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cfap53Q9D439 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cfap53Q9D439 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cfap53Q9D439 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cfap53Q9D439 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Cfap53Q9D439 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC15.7■□□□□ 0.1
Cfap53Q9D439 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Cfap53Q9D439 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cfap53Q9D439 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Cfap53Q9D439 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Cfap53Q9D439 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Cfap53Q9D439 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cfap53Q9D439 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC15.7■□□□□ 0.1
Cfap53Q9D439 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC15.7■□□□□ 0.1
Cfap53Q9D439 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC15.7■□□□□ 0.1
Cfap53Q9D439 Gm18889-201ENSMUST00000174284 929 ntBASIC15.7■□□□□ 0.1
Cfap53Q9D439 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC15.7■□□□□ 0.1
Cfap53Q9D439 Ighv8-7-201ENSMUST00000194349 297 ntBASIC15.7■□□□□ 0.1
Cfap53Q9D439 Gm2756-201ENSMUST00000195851 400 ntBASIC15.7■□□□□ 0.1
Cfap53Q9D439 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Cfap53Q9D439 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cfap53Q9D439 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cfap53Q9D439 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC15.7■□□□□ 0.1
Cfap53Q9D439 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cfap53Q9D439 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cfap53Q9D439 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cfap53Q9D439 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cfap53Q9D439 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Cfap53Q9D439 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC15.7■□□□□ 0.1
Cfap53Q9D439 Gm4081-201ENSMUST00000195287 1838 ntBASIC15.7■□□□□ 0.1
Cfap53Q9D439 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cfap53Q9D439 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cfap53Q9D439 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cfap53Q9D439 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Cfap53Q9D439 Gm6018-201ENSMUST00000216090 1306 ntBASIC15.69■□□□□ 0.1
Cfap53Q9D439 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cfap53Q9D439 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Cfap53Q9D439 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cfap53Q9D439 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cfap53Q9D439 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cfap53Q9D439 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cfap53Q9D439 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cfap53Q9D439 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cfap53Q9D439 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC15.69■□□□□ 0.1
Cfap53Q9D439 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cfap53Q9D439 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cfap53Q9D439 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cfap53Q9D439 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cfap53Q9D439 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cfap53Q9D439 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cfap53Q9D439 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms