Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
Vps28Q9D1C8 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.68□□□□□ -0.06
Vps28Q9D1C8 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Vps28Q9D1C8 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.67□□□□□ -0.06
Vps28Q9D1C8 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps28Q9D1C8 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps28Q9D1C8 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.67□□□□□ -0.06
Vps28Q9D1C8 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC14.67□□□□□ -0.06
Vps28Q9D1C8 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.67□□□□□ -0.06
Vps28Q9D1C8 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps28Q9D1C8 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps28Q9D1C8 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Vps28Q9D1C8 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps28Q9D1C8 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps28Q9D1C8 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps28Q9D1C8 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps28Q9D1C8 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps28Q9D1C8 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps28Q9D1C8 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC14.67□□□□□ -0.06
Vps28Q9D1C8 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps28Q9D1C8 Gm5566-201ENSMUST00000116118 459 ntBASIC14.67□□□□□ -0.06
Vps28Q9D1C8 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC14.67□□□□□ -0.06
Vps28Q9D1C8 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
Vps28Q9D1C8 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Vps28Q9D1C8 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Vps28Q9D1C8 Gm38294-201ENSMUST00000192831 381 ntBASIC14.67□□□□□ -0.06
Vps28Q9D1C8 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Vps28Q9D1C8 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.67□□□□□ -0.06
Vps28Q9D1C8 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.67□□□□□ -0.06
Vps28Q9D1C8 Rbfox2-208ENSMUST00000227930 1218 ntBASIC14.67□□□□□ -0.06
Vps28Q9D1C8 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Vps28Q9D1C8 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Vps28Q9D1C8 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps28Q9D1C8 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps28Q9D1C8 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Vps28Q9D1C8 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps28Q9D1C8 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Vps28Q9D1C8 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Vps28Q9D1C8 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps28Q9D1C8 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps28Q9D1C8 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps28Q9D1C8 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps28Q9D1C8 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps28Q9D1C8 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps28Q9D1C8 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps28Q9D1C8 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps28Q9D1C8 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps28Q9D1C8 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Vps28Q9D1C8 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps28Q9D1C8 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps28Q9D1C8 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps28Q9D1C8 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Vps28Q9D1C8 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps28Q9D1C8 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps28Q9D1C8 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps28Q9D1C8 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps28Q9D1C8 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps28Q9D1C8 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Vps28Q9D1C8 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC14.66□□□□□ -0.06
Vps28Q9D1C8 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC14.66□□□□□ -0.06
Vps28Q9D1C8 Gm6888-201ENSMUST00000221983 706 ntBASIC14.66□□□□□ -0.06
Vps28Q9D1C8 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps28Q9D1C8 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Vps28Q9D1C8 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Vps28Q9D1C8 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps28Q9D1C8 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps28Q9D1C8 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Vps28Q9D1C8 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps28Q9D1C8 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.66□□□□□ -0.06
Vps28Q9D1C8 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.66□□□□□ -0.06
Vps28Q9D1C8 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Vps28Q9D1C8 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps28Q9D1C8 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps28Q9D1C8 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Vps28Q9D1C8 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Vps28Q9D1C8 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps28Q9D1C8 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps28Q9D1C8 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.65□□□□□ -0.06
Vps28Q9D1C8 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps28Q9D1C8 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Vps28Q9D1C8 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Vps28Q9D1C8 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Vps28Q9D1C8 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC14.65□□□□□ -0.06
Vps28Q9D1C8 Gm13223-201ENSMUST00000118609 747 ntBASIC14.65□□□□□ -0.06
Vps28Q9D1C8 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC14.65□□□□□ -0.06
Vps28Q9D1C8 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps28Q9D1C8 Mir7023-201ENSMUST00000185093 64 ntBASIC14.65□□□□□ -0.06
Vps28Q9D1C8 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps28Q9D1C8 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Vps28Q9D1C8 AC158982.1-201ENSMUST00000228377 901 ntBASIC14.65□□□□□ -0.06
Vps28Q9D1C8 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Vps28Q9D1C8 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps28Q9D1C8 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Vps28Q9D1C8 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps28Q9D1C8 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.65□□□□□ -0.06
Vps28Q9D1C8 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps28Q9D1C8 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC14.65□□□□□ -0.06
Vps28Q9D1C8 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps28Q9D1C8 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps28Q9D1C8 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms