Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.28
Smc3Q9CW03 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smc3Q9CW03 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smc3Q9CW03 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smc3Q9CW03 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smc3Q9CW03 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smc3Q9CW03 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Smc3Q9CW03 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smc3Q9CW03 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smc3Q9CW03 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smc3Q9CW03 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smc3Q9CW03 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Smc3Q9CW03 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC16.82■□□□□ 0.28
Smc3Q9CW03 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smc3Q9CW03 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smc3Q9CW03 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smc3Q9CW03 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Smc3Q9CW03 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Smc3Q9CW03 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smc3Q9CW03 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Smc3Q9CW03 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smc3Q9CW03 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smc3Q9CW03 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Smc3Q9CW03 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC16.82■□□□□ 0.28
Smc3Q9CW03 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Smc3Q9CW03 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smc3Q9CW03 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Smc3Q9CW03 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Smc3Q9CW03 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smc3Q9CW03 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smc3Q9CW03 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smc3Q9CW03 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Smc3Q9CW03 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smc3Q9CW03 Klk2-ps-201ENSMUST00000205342 571 ntBASIC16.82■□□□□ 0.28
Smc3Q9CW03 AC102291.3-201ENSMUST00000226566 405 ntBASIC16.82■□□□□ 0.28
Smc3Q9CW03 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smc3Q9CW03 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smc3Q9CW03 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Smc3Q9CW03 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC16.82■□□□□ 0.28
Smc3Q9CW03 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smc3Q9CW03 Gm38102-201ENSMUST00000192791 1935 ntBASIC16.82■□□□□ 0.28
Smc3Q9CW03 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smc3Q9CW03 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Smc3Q9CW03 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Smc3Q9CW03 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smc3Q9CW03 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smc3Q9CW03 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smc3Q9CW03 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smc3Q9CW03 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smc3Q9CW03 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smc3Q9CW03 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smc3Q9CW03 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smc3Q9CW03 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smc3Q9CW03 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smc3Q9CW03 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Smc3Q9CW03 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smc3Q9CW03 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
Smc3Q9CW03 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smc3Q9CW03 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC16.81■□□□□ 0.28
Smc3Q9CW03 CT025555.1-201ENSMUST00000225901 1217 ntBASIC16.81■□□□□ 0.28
Smc3Q9CW03 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smc3Q9CW03 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC16.81■□□□□ 0.28
Smc3Q9CW03 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Smc3Q9CW03 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC16.81■□□□□ 0.28
Smc3Q9CW03 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Smc3Q9CW03 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Smc3Q9CW03 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smc3Q9CW03 AC166491.1-201ENSMUST00000227053 2308 ntBASIC16.81■□□□□ 0.28
Smc3Q9CW03 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Smc3Q9CW03 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Smc3Q9CW03 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smc3Q9CW03 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Smc3Q9CW03 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smc3Q9CW03 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smc3Q9CW03 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smc3Q9CW03 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smc3Q9CW03 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC16.8■□□□□ 0.28
Smc3Q9CW03 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smc3Q9CW03 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC16.8■□□□□ 0.28
Smc3Q9CW03 Ksr1-207ENSMUST00000226282 5260 ntBASIC16.8■□□□□ 0.28
Smc3Q9CW03 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC16.8■□□□□ 0.28
Smc3Q9CW03 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smc3Q9CW03 Gm19863-201ENSMUST00000192480 2218 ntBASIC16.8■□□□□ 0.28
Smc3Q9CW03 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smc3Q9CW03 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smc3Q9CW03 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smc3Q9CW03 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smc3Q9CW03 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC16.8■□□□□ 0.28
Smc3Q9CW03 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smc3Q9CW03 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Smc3Q9CW03 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smc3Q9CW03 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC16.8■□□□□ 0.28
Smc3Q9CW03 Gm18733-201ENSMUST00000173950 856 ntBASIC16.8■□□□□ 0.28
Smc3Q9CW03 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Smc3Q9CW03 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC16.8■□□□□ 0.28
Smc3Q9CW03 Psmb5-202ENSMUST00000227257 622 ntBASIC16.8■□□□□ 0.28
Smc3Q9CW03 Mzt1-203ENSMUST00000227948 952 ntBASIC16.8■□□□□ 0.28
Smc3Q9CW03 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smc3Q9CW03 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smc3Q9CW03 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms