Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Krt88Q9CPR6 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Krt88Q9CPR6 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Krt88Q9CPR6 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Krt88Q9CPR6 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Krt88Q9CPR6 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Krt88Q9CPR6 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Krt88Q9CPR6 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Krt88Q9CPR6 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Krt88Q9CPR6 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Krt88Q9CPR6 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Krt88Q9CPR6 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Krt88Q9CPR6 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC12.91□□□□□ -0.34
Krt88Q9CPR6 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Krt88Q9CPR6 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Krt88Q9CPR6 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Krt88Q9CPR6 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Krt88Q9CPR6 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Krt88Q9CPR6 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Krt88Q9CPR6 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Krt88Q9CPR6 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Krt88Q9CPR6 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Krt88Q9CPR6 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Krt88Q9CPR6 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Krt88Q9CPR6 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Krt88Q9CPR6 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Krt88Q9CPR6 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Krt88Q9CPR6 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC12.91□□□□□ -0.34
Krt88Q9CPR6 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Krt88Q9CPR6 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Krt88Q9CPR6 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Krt88Q9CPR6 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Krt88Q9CPR6 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Krt88Q9CPR6 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Krt88Q9CPR6 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Krt88Q9CPR6 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Krt88Q9CPR6 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Krt88Q9CPR6 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Krt88Q9CPR6 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.91□□□□□ -0.34
Krt88Q9CPR6 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Krt88Q9CPR6 Gm37411-201ENSMUST00000194180 2282 ntBASIC12.91□□□□□ -0.34
Krt88Q9CPR6 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Krt88Q9CPR6 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Krt88Q9CPR6 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Krt88Q9CPR6 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Krt88Q9CPR6 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Krt88Q9CPR6 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Krt88Q9CPR6 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
Krt88Q9CPR6 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Krt88Q9CPR6 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Krt88Q9CPR6 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Krt88Q9CPR6 Gm8096-201ENSMUST00000209921 1591 ntBASIC12.9□□□□□ -0.34
Krt88Q9CPR6 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Krt88Q9CPR6 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Krt88Q9CPR6 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Krt88Q9CPR6 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Krt88Q9CPR6 Gm37500-201ENSMUST00000192059 1443 ntBASIC12.9□□□□□ -0.34
Krt88Q9CPR6 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Krt88Q9CPR6 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Krt88Q9CPR6 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
Krt88Q9CPR6 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC12.9□□□□□ -0.34
Krt88Q9CPR6 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Krt88Q9CPR6 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Krt88Q9CPR6 Gm6944-201ENSMUST00000182449 1006 ntBASIC12.9□□□□□ -0.34
Krt88Q9CPR6 Gm17971-201ENSMUST00000190239 806 ntBASIC12.9□□□□□ -0.34
Krt88Q9CPR6 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Krt88Q9CPR6 Gm18246-201ENSMUST00000221023 728 ntBASIC12.9□□□□□ -0.34
Krt88Q9CPR6 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Krt88Q9CPR6 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Krt88Q9CPR6 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Krt88Q9CPR6 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Krt88Q9CPR6 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC12.9□□□□□ -0.34
Krt88Q9CPR6 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Krt88Q9CPR6 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Krt88Q9CPR6 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC12.9□□□□□ -0.34
Krt88Q9CPR6 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Krt88Q9CPR6 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Krt88Q9CPR6 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Krt88Q9CPR6 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Krt88Q9CPR6 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC12.9□□□□□ -0.34
Krt88Q9CPR6 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC12.9□□□□□ -0.35
Krt88Q9CPR6 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Krt88Q9CPR6 Gm30238-201ENSMUST00000195528 2603 ntBASIC12.9□□□□□ -0.35
Krt88Q9CPR6 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.35
Krt88Q9CPR6 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Krt88Q9CPR6 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Krt88Q9CPR6 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
Krt88Q9CPR6 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Krt88Q9CPR6 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Krt88Q9CPR6 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Krt88Q9CPR6 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Krt88Q9CPR6 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Krt88Q9CPR6 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Krt88Q9CPR6 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Krt88Q9CPR6 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
Krt88Q9CPR6 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Krt88Q9CPR6 AC131743.5-201ENSMUST00000220775 1618 ntBASIC12.89□□□□□ -0.35
Krt88Q9CPR6 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Krt88Q9CPR6 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Krt88Q9CPR6 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms