Protein–RNA interactions for Protein: Q99PV0

Prpf8, Pre-mRNA-processing-splicing factor 8, mousemouse

Known RBP Predictions only

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf8Q99PV0 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Prpf8Q99PV0 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Prpf8Q99PV0 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Prpf8Q99PV0 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Prpf8Q99PV0 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Prpf8Q99PV0 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Prpf8Q99PV0 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Prpf8Q99PV0 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Prpf8Q99PV0 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Prpf8Q99PV0 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Prpf8Q99PV0 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Prpf8Q99PV0 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Prpf8Q99PV0 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Prpf8Q99PV0 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Prpf8Q99PV0 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Prpf8Q99PV0 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Prpf8Q99PV0 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Prpf8Q99PV0 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Prpf8Q99PV0 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Prpf8Q99PV0 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Prpf8Q99PV0 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Prpf8Q99PV0 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Prpf8Q99PV0 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Prpf8Q99PV0 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Prpf8Q99PV0 Gm11918-201ENSMUST00000121660 179 ntBASIC11.74□□□□□ -0.53
Prpf8Q99PV0 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC11.74□□□□□ -0.53
Prpf8Q99PV0 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC11.74□□□□□ -0.53
Prpf8Q99PV0 AC123645.1-201ENSMUST00000228469 605 ntBASIC11.74□□□□□ -0.53
Prpf8Q99PV0 Gm9797-201ENSMUST00000052902 613 ntBASIC11.74□□□□□ -0.53
Prpf8Q99PV0 Mxra8os-201ENSMUST00000097740 687 ntBASIC11.74□□□□□ -0.53
Prpf8Q99PV0 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Prpf8Q99PV0 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Prpf8Q99PV0 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Prpf8Q99PV0 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Prpf8Q99PV0 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Prpf8Q99PV0 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Prpf8Q99PV0 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Prpf8Q99PV0 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC11.73□□□□□ -0.53
Prpf8Q99PV0 Ldha-ps-201ENSMUST00000119390 995 ntBASIC11.73□□□□□ -0.53
Prpf8Q99PV0 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Prpf8Q99PV0 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC11.73□□□□□ -0.53
Prpf8Q99PV0 Ighv5-13-201ENSMUST00000193550 290 ntBASIC11.73□□□□□ -0.53
Prpf8Q99PV0 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Prpf8Q99PV0 Olfr286-202ENSMUST00000205305 969 ntBASIC11.73□□□□□ -0.53
Prpf8Q99PV0 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Prpf8Q99PV0 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Prpf8Q99PV0 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Prpf8Q99PV0 Gm27528-202ENSMUST00000222916 2012 ntBASIC11.73□□□□□ -0.53
Prpf8Q99PV0 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Prpf8Q99PV0 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC11.73□□□□□ -0.53
Prpf8Q99PV0 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Prpf8Q99PV0 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Prpf8Q99PV0 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Prpf8Q99PV0 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
Prpf8Q99PV0 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Prpf8Q99PV0 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Prpf8Q99PV0 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Prpf8Q99PV0 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
Prpf8Q99PV0 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Prpf8Q99PV0 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Prpf8Q99PV0 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Prpf8Q99PV0 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Prpf8Q99PV0 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Prpf8Q99PV0 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Prpf8Q99PV0 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Prpf8Q99PV0 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC11.72□□□□□ -0.53
Prpf8Q99PV0 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Prpf8Q99PV0 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Prpf8Q99PV0 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Prpf8Q99PV0 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Prpf8Q99PV0 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC11.72□□□□□ -0.53
Prpf8Q99PV0 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Prpf8Q99PV0 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Prpf8Q99PV0 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Prpf8Q99PV0 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC11.72□□□□□ -0.53
Prpf8Q99PV0 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Prpf8Q99PV0 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Prpf8Q99PV0 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Prpf8Q99PV0 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Prpf8Q99PV0 Gm16011-201ENSMUST00000121567 2662 ntBASIC11.72□□□□□ -0.53
Prpf8Q99PV0 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Prpf8Q99PV0 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Prpf8Q99PV0 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Prpf8Q99PV0 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Prpf8Q99PV0 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Prpf8Q99PV0 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Prpf8Q99PV0 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Prpf8Q99PV0 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Prpf8Q99PV0 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Prpf8Q99PV0 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Prpf8Q99PV0 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Prpf8Q99PV0 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC11.72□□□□□ -0.53
Prpf8Q99PV0 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC11.72□□□□□ -0.53
Prpf8Q99PV0 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Prpf8Q99PV0 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Prpf8Q99PV0 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Prpf8Q99PV0 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC11.72□□□□□ -0.53
Prpf8Q99PV0 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Prpf8Q99PV0 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC11.72□□□□□ -0.53
Prpf8Q99PV0 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms