Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trim34aQ99PP6 Gm37714-201ENSMUST00000194742 342 ntBASIC17.58■□□□□ 0.4
Trim34aQ99PP6 AC155258.1-201ENSMUST00000219303 253 ntBASIC17.58■□□□□ 0.4
Trim34aQ99PP6 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Trim34aQ99PP6 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim34aQ99PP6 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim34aQ99PP6 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim34aQ99PP6 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim34aQ99PP6 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trim34aQ99PP6 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim34aQ99PP6 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim34aQ99PP6 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim34aQ99PP6 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim34aQ99PP6 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim34aQ99PP6 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim34aQ99PP6 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim34aQ99PP6 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Trim34aQ99PP6 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim34aQ99PP6 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim34aQ99PP6 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC17.57■□□□□ 0.4
Trim34aQ99PP6 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC17.57■□□□□ 0.4
Trim34aQ99PP6 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim34aQ99PP6 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC17.57■□□□□ 0.4
Trim34aQ99PP6 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Trim34aQ99PP6 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trim34aQ99PP6 Mir7085-201ENSMUST00000184353 66 ntBASIC17.57■□□□□ 0.4
Trim34aQ99PP6 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Trim34aQ99PP6 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim34aQ99PP6 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim34aQ99PP6 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim34aQ99PP6 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim34aQ99PP6 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim34aQ99PP6 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC17.57■□□□□ 0.4
Trim34aQ99PP6 Gm29340-201ENSMUST00000188763 3854 ntBASIC17.57■□□□□ 0.4
Trim34aQ99PP6 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim34aQ99PP6 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim34aQ99PP6 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim34aQ99PP6 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim34aQ99PP6 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim34aQ99PP6 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim34aQ99PP6 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim34aQ99PP6 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Trim34aQ99PP6 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim34aQ99PP6 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim34aQ99PP6 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim34aQ99PP6 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trim34aQ99PP6 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim34aQ99PP6 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC17.56■□□□□ 0.4
Trim34aQ99PP6 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim34aQ99PP6 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trim34aQ99PP6 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim34aQ99PP6 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Trim34aQ99PP6 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trim34aQ99PP6 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC17.56■□□□□ 0.4
Trim34aQ99PP6 AC156560.2-201ENSMUST00000221232 264 ntBASIC17.56■□□□□ 0.4
Trim34aQ99PP6 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim34aQ99PP6 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim34aQ99PP6 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim34aQ99PP6 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Trim34aQ99PP6 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim34aQ99PP6 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim34aQ99PP6 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim34aQ99PP6 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trim34aQ99PP6 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim34aQ99PP6 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim34aQ99PP6 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim34aQ99PP6 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim34aQ99PP6 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim34aQ99PP6 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim34aQ99PP6 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim34aQ99PP6 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim34aQ99PP6 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Trim34aQ99PP6 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC17.55■□□□□ 0.4
Trim34aQ99PP6 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC17.55■□□□□ 0.4
Trim34aQ99PP6 AC153962.4-201ENSMUST00000217878 242 ntBASIC17.55■□□□□ 0.4
Trim34aQ99PP6 Gm18027-201ENSMUST00000218947 619 ntBASIC17.55■□□□□ 0.4
Trim34aQ99PP6 Gm7446-201ENSMUST00000221035 1240 ntBASIC17.55■□□□□ 0.4
Trim34aQ99PP6 AC102291.3-201ENSMUST00000226566 405 ntBASIC17.55■□□□□ 0.4
Trim34aQ99PP6 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim34aQ99PP6 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trim34aQ99PP6 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Trim34aQ99PP6 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Trim34aQ99PP6 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim34aQ99PP6 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim34aQ99PP6 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim34aQ99PP6 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim34aQ99PP6 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim34aQ99PP6 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim34aQ99PP6 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Trim34aQ99PP6 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim34aQ99PP6 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim34aQ99PP6 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim34aQ99PP6 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim34aQ99PP6 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim34aQ99PP6 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim34aQ99PP6 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim34aQ99PP6 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Trim34aQ99PP6 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim34aQ99PP6 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Trim34aQ99PP6 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms