Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim8Q99PJ2 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim8Q99PJ2 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Trim8Q99PJ2 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim8Q99PJ2 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim8Q99PJ2 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim8Q99PJ2 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim8Q99PJ2 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim8Q99PJ2 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC14.03□□□□□ -0.16
Trim8Q99PJ2 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim8Q99PJ2 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.03□□□□□ -0.16
Trim8Q99PJ2 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim8Q99PJ2 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim8Q99PJ2 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14.03□□□□□ -0.16
Trim8Q99PJ2 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim8Q99PJ2 Gm6443-201ENSMUST00000203599 874 ntBASIC14.03□□□□□ -0.16
Trim8Q99PJ2 Gm9449-201ENSMUST00000207265 1011 ntBASIC14.03□□□□□ -0.16
Trim8Q99PJ2 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim8Q99PJ2 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim8Q99PJ2 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim8Q99PJ2 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.03□□□□□ -0.16
Trim8Q99PJ2 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim8Q99PJ2 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim8Q99PJ2 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC14.03□□□□□ -0.16
Trim8Q99PJ2 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim8Q99PJ2 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Trim8Q99PJ2 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Trim8Q99PJ2 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC14.03□□□□□ -0.16
Trim8Q99PJ2 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim8Q99PJ2 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim8Q99PJ2 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim8Q99PJ2 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim8Q99PJ2 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim8Q99PJ2 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim8Q99PJ2 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim8Q99PJ2 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim8Q99PJ2 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim8Q99PJ2 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim8Q99PJ2 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim8Q99PJ2 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Trim8Q99PJ2 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trim8Q99PJ2 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Trim8Q99PJ2 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim8Q99PJ2 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim8Q99PJ2 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim8Q99PJ2 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim8Q99PJ2 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim8Q99PJ2 Gm13036-201ENSMUST00000117799 748 ntBASIC14.02□□□□□ -0.17
Trim8Q99PJ2 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Trim8Q99PJ2 Mir5131-201ENSMUST00000175426 93 ntBASIC14.02□□□□□ -0.17
Trim8Q99PJ2 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC14.02□□□□□ -0.17
Trim8Q99PJ2 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC14.02□□□□□ -0.17
Trim8Q99PJ2 Olfr286-202ENSMUST00000205305 969 ntBASIC14.02□□□□□ -0.17
Trim8Q99PJ2 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.17
Trim8Q99PJ2 Gm10060-201ENSMUST00000212002 111 ntBASIC14.02□□□□□ -0.17
Trim8Q99PJ2 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trim8Q99PJ2 AV026068-213ENSMUST00000223675 1171 ntBASIC14.02□□□□□ -0.17
Trim8Q99PJ2 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim8Q99PJ2 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim8Q99PJ2 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trim8Q99PJ2 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trim8Q99PJ2 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Trim8Q99PJ2 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
Trim8Q99PJ2 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim8Q99PJ2 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Trim8Q99PJ2 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim8Q99PJ2 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC14.02□□□□□ -0.17
Trim8Q99PJ2 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trim8Q99PJ2 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC14.02□□□□□ -0.17
Trim8Q99PJ2 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim8Q99PJ2 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim8Q99PJ2 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim8Q99PJ2 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim8Q99PJ2 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
Trim8Q99PJ2 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Trim8Q99PJ2 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim8Q99PJ2 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim8Q99PJ2 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim8Q99PJ2 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim8Q99PJ2 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim8Q99PJ2 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim8Q99PJ2 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC14.01□□□□□ -0.17
Trim8Q99PJ2 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim8Q99PJ2 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim8Q99PJ2 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim8Q99PJ2 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim8Q99PJ2 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim8Q99PJ2 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim8Q99PJ2 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim8Q99PJ2 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim8Q99PJ2 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim8Q99PJ2 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim8Q99PJ2 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim8Q99PJ2 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim8Q99PJ2 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim8Q99PJ2 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim8Q99PJ2 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim8Q99PJ2 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim8Q99PJ2 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC14.01□□□□□ -0.17
Trim8Q99PJ2 AC138767.1-201ENSMUST00000222661 415 ntBASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms