Protein–RNA interactions for Protein: Q99M54

Cdca3, Cell division cycle-associated protein 3, mousemouse

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdca3Q99M54 Gm7336-201ENSMUST00000107041 1232 ntBASIC13.33□□□□□ -0.28
Cdca3Q99M54 Gm14127-201ENSMUST00000117906 678 ntBASIC13.33□□□□□ -0.28
Cdca3Q99M54 Gm16198-201ENSMUST00000118766 670 ntBASIC13.33□□□□□ -0.28
Cdca3Q99M54 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC13.33□□□□□ -0.28
Cdca3Q99M54 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Cdca3Q99M54 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC13.33□□□□□ -0.28
Cdca3Q99M54 Gm17837-201ENSMUST00000186435 985 ntBASIC13.33□□□□□ -0.28
Cdca3Q99M54 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC13.33□□□□□ -0.28
Cdca3Q99M54 Gm10154-201ENSMUST00000084445 354 ntBASIC13.33□□□□□ -0.28
Cdca3Q99M54 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cdca3Q99M54 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Cdca3Q99M54 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdca3Q99M54 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdca3Q99M54 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdca3Q99M54 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdca3Q99M54 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdca3Q99M54 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Cdca3Q99M54 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdca3Q99M54 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdca3Q99M54 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdca3Q99M54 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdca3Q99M54 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdca3Q99M54 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Cdca3Q99M54 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdca3Q99M54 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cdca3Q99M54 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.33□□□□□ -0.28
Cdca3Q99M54 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdca3Q99M54 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC13.32□□□□□ -0.28
Cdca3Q99M54 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cdca3Q99M54 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdca3Q99M54 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC13.32□□□□□ -0.28
Cdca3Q99M54 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.32□□□□□ -0.28
Cdca3Q99M54 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC13.32□□□□□ -0.28
Cdca3Q99M54 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cdca3Q99M54 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC13.32□□□□□ -0.28
Cdca3Q99M54 CT025555.1-201ENSMUST00000225901 1217 ntBASIC13.32□□□□□ -0.28
Cdca3Q99M54 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdca3Q99M54 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC13.32□□□□□ -0.28
Cdca3Q99M54 Gm21451-201ENSMUST00000111062 2775 ntBASIC13.32□□□□□ -0.28
Cdca3Q99M54 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cdca3Q99M54 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdca3Q99M54 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdca3Q99M54 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdca3Q99M54 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.32□□□□□ -0.28
Cdca3Q99M54 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdca3Q99M54 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdca3Q99M54 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdca3Q99M54 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdca3Q99M54 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdca3Q99M54 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdca3Q99M54 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Cdca3Q99M54 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdca3Q99M54 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdca3Q99M54 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdca3Q99M54 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Cdca3Q99M54 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdca3Q99M54 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdca3Q99M54 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdca3Q99M54 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cdca3Q99M54 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Cdca3Q99M54 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Cdca3Q99M54 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdca3Q99M54 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdca3Q99M54 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.31□□□□□ -0.28
Cdca3Q99M54 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Cdca3Q99M54 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC13.31□□□□□ -0.28
Cdca3Q99M54 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.31□□□□□ -0.28
Cdca3Q99M54 Gm25287-201ENSMUST00000103846 110 ntBASIC13.31□□□□□ -0.28
Cdca3Q99M54 Gm22918-201ENSMUST00000103855 110 ntBASIC13.31□□□□□ -0.28
Cdca3Q99M54 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cdca3Q99M54 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cdca3Q99M54 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cdca3Q99M54 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cdca3Q99M54 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdca3Q99M54 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Cdca3Q99M54 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cdca3Q99M54 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Cdca3Q99M54 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Cdca3Q99M54 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdca3Q99M54 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.31□□□□□ -0.28
Cdca3Q99M54 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cdca3Q99M54 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Cdca3Q99M54 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdca3Q99M54 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdca3Q99M54 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Cdca3Q99M54 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Cdca3Q99M54 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdca3Q99M54 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Cdca3Q99M54 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdca3Q99M54 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdca3Q99M54 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdca3Q99M54 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Cdca3Q99M54 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdca3Q99M54 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC13.3□□□□□ -0.28
Cdca3Q99M54 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdca3Q99M54 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdca3Q99M54 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdca3Q99M54 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdca3Q99M54 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cdca3Q99M54 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms