Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp1b1Q99LU0 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp1b1Q99LU0 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC13.55□□□□□ -0.24
Chmp1b1Q99LU0 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp1b1Q99LU0 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp1b1Q99LU0 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp1b1Q99LU0 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp1b1Q99LU0 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp1b1Q99LU0 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp1b1Q99LU0 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp1b1Q99LU0 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.55□□□□□ -0.24
Chmp1b1Q99LU0 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.55□□□□□ -0.24
Chmp1b1Q99LU0 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp1b1Q99LU0 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp1b1Q99LU0 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp1b1Q99LU0 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC13.55□□□□□ -0.24
Chmp1b1Q99LU0 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC13.55□□□□□ -0.24
Chmp1b1Q99LU0 Gm4913-201ENSMUST00000117075 1290 ntBASIC13.55□□□□□ -0.24
Chmp1b1Q99LU0 Gm9385-201ENSMUST00000117563 472 ntBASIC13.55□□□□□ -0.24
Chmp1b1Q99LU0 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.55□□□□□ -0.24
Chmp1b1Q99LU0 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp1b1Q99LU0 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC13.55□□□□□ -0.24
Chmp1b1Q99LU0 Gm9726-201ENSMUST00000180321 678 ntBASIC13.55□□□□□ -0.24
Chmp1b1Q99LU0 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC13.55□□□□□ -0.24
Chmp1b1Q99LU0 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp1b1Q99LU0 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp1b1Q99LU0 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp1b1Q99LU0 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Chmp1b1Q99LU0 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp1b1Q99LU0 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp1b1Q99LU0 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp1b1Q99LU0 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp1b1Q99LU0 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Chmp1b1Q99LU0 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Chmp1b1Q99LU0 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC13.55□□□□□ -0.24
Chmp1b1Q99LU0 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp1b1Q99LU0 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp1b1Q99LU0 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp1b1Q99LU0 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp1b1Q99LU0 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp1b1Q99LU0 AC164565.1-201ENSMUST00000217520 1484 ntBASIC13.55□□□□□ -0.24
Chmp1b1Q99LU0 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp1b1Q99LU0 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Chmp1b1Q99LU0 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Chmp1b1Q99LU0 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp1b1Q99LU0 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp1b1Q99LU0 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp1b1Q99LU0 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp1b1Q99LU0 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp1b1Q99LU0 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp1b1Q99LU0 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp1b1Q99LU0 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp1b1Q99LU0 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp1b1Q99LU0 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp1b1Q99LU0 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.54□□□□□ -0.24
Chmp1b1Q99LU0 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp1b1Q99LU0 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp1b1Q99LU0 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp1b1Q99LU0 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC13.54□□□□□ -0.24
Chmp1b1Q99LU0 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC13.54□□□□□ -0.24
Chmp1b1Q99LU0 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp1b1Q99LU0 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Chmp1b1Q99LU0 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp1b1Q99LU0 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Chmp1b1Q99LU0 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp1b1Q99LU0 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp1b1Q99LU0 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp1b1Q99LU0 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp1b1Q99LU0 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp1b1Q99LU0 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp1b1Q99LU0 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp1b1Q99LU0 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp1b1Q99LU0 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp1b1Q99LU0 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Chmp1b1Q99LU0 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Chmp1b1Q99LU0 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Chmp1b1Q99LU0 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp1b1Q99LU0 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp1b1Q99LU0 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Chmp1b1Q99LU0 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC13.53□□□□□ -0.24
Chmp1b1Q99LU0 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp1b1Q99LU0 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp1b1Q99LU0 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp1b1Q99LU0 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Chmp1b1Q99LU0 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp1b1Q99LU0 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Chmp1b1Q99LU0 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Chmp1b1Q99LU0 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp1b1Q99LU0 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp1b1Q99LU0 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC13.53□□□□□ -0.24
Chmp1b1Q99LU0 Gm15427-201ENSMUST00000117288 531 ntBASIC13.53□□□□□ -0.24
Chmp1b1Q99LU0 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp1b1Q99LU0 Gm13464-201ENSMUST00000119418 935 ntBASIC13.53□□□□□ -0.24
Chmp1b1Q99LU0 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC13.53□□□□□ -0.24
Chmp1b1Q99LU0 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC13.53□□□□□ -0.24
Chmp1b1Q99LU0 Gm27702-201ENSMUST00000184512 56 ntBASIC13.53□□□□□ -0.24
Chmp1b1Q99LU0 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp1b1Q99LU0 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC13.53□□□□□ -0.24
Chmp1b1Q99LU0 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp1b1Q99LU0 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms