Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC17.55■□□□□ 0.4
RtcbQ99LF4 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RtcbQ99LF4 Gm5370-201ENSMUST00000187187 574 ntBASIC17.55■□□□□ 0.4
RtcbQ99LF4 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC17.55■□□□□ 0.4
RtcbQ99LF4 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
RtcbQ99LF4 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
RtcbQ99LF4 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RtcbQ99LF4 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RtcbQ99LF4 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RtcbQ99LF4 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RtcbQ99LF4 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
RtcbQ99LF4 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RtcbQ99LF4 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RtcbQ99LF4 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RtcbQ99LF4 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RtcbQ99LF4 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
RtcbQ99LF4 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RtcbQ99LF4 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
RtcbQ99LF4 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC17.54■□□□□ 0.4
RtcbQ99LF4 Dctn4-202ENSMUST00000223590 1530 ntBASIC17.54■□□□□ 0.4
RtcbQ99LF4 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RtcbQ99LF4 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
RtcbQ99LF4 Gm15371-201ENSMUST00000117057 784 ntBASIC17.54■□□□□ 0.4
RtcbQ99LF4 Gm5940-201ENSMUST00000117582 1068 ntBASIC17.54■□□□□ 0.4
RtcbQ99LF4 Gm11557-201ENSMUST00000120200 1008 ntBASIC17.54■□□□□ 0.4
RtcbQ99LF4 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC17.54■□□□□ 0.4
RtcbQ99LF4 Gm24420-201ENSMUST00000176676 59 ntBASIC17.54■□□□□ 0.4
RtcbQ99LF4 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC17.54■□□□□ 0.4
RtcbQ99LF4 Gm8927-201ENSMUST00000181978 981 ntBASIC17.54■□□□□ 0.4
RtcbQ99LF4 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RtcbQ99LF4 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC17.54■□□□□ 0.4
RtcbQ99LF4 Gm7399-201ENSMUST00000032395 858 ntBASIC17.54■□□□□ 0.4
RtcbQ99LF4 Gm3222-201ENSMUST00000071282 990 ntBASIC17.54■□□□□ 0.4
RtcbQ99LF4 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RtcbQ99LF4 Gm44616-201ENSMUST00000206417 1732 ntBASIC17.54■□□□□ 0.4
RtcbQ99LF4 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RtcbQ99LF4 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
RtcbQ99LF4 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RtcbQ99LF4 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RtcbQ99LF4 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
RtcbQ99LF4 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
RtcbQ99LF4 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
RtcbQ99LF4 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RtcbQ99LF4 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RtcbQ99LF4 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RtcbQ99LF4 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RtcbQ99LF4 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RtcbQ99LF4 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
RtcbQ99LF4 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RtcbQ99LF4 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
RtcbQ99LF4 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RtcbQ99LF4 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
RtcbQ99LF4 Gm23931-201ENSMUST00000103842 109 ntBASIC17.53■□□□□ 0.4
RtcbQ99LF4 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RtcbQ99LF4 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC17.53■□□□□ 0.4
RtcbQ99LF4 Gm24644-201ENSMUST00000157114 139 ntBASIC17.53■□□□□ 0.4
RtcbQ99LF4 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC17.53■□□□□ 0.4
RtcbQ99LF4 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC17.53■□□□□ 0.4
RtcbQ99LF4 Gm27772-201ENSMUST00000184900 187 ntBASIC17.53■□□□□ 0.4
RtcbQ99LF4 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC17.53■□□□□ 0.4
RtcbQ99LF4 Gm5069-202ENSMUST00000192714 1011 ntBASIC17.53■□□□□ 0.4
RtcbQ99LF4 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RtcbQ99LF4 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC17.53■□□□□ 0.4
RtcbQ99LF4 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RtcbQ99LF4 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RtcbQ99LF4 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
RtcbQ99LF4 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RtcbQ99LF4 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RtcbQ99LF4 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
RtcbQ99LF4 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RtcbQ99LF4 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
RtcbQ99LF4 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
RtcbQ99LF4 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RtcbQ99LF4 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RtcbQ99LF4 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RtcbQ99LF4 Gm37812-201ENSMUST00000195216 2475 ntBASIC17.53■□□□□ 0.4
RtcbQ99LF4 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RtcbQ99LF4 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RtcbQ99LF4 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RtcbQ99LF4 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RtcbQ99LF4 BC037039-201ENSMUST00000192003 2205 ntBASIC17.52■□□□□ 0.4
RtcbQ99LF4 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RtcbQ99LF4 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RtcbQ99LF4 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RtcbQ99LF4 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RtcbQ99LF4 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RtcbQ99LF4 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RtcbQ99LF4 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
RtcbQ99LF4 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
RtcbQ99LF4 Gm12485-201ENSMUST00000119641 291 ntBASIC17.52■□□□□ 0.4
RtcbQ99LF4 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC17.52■□□□□ 0.4
RtcbQ99LF4 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RtcbQ99LF4 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC17.52■□□□□ 0.4
RtcbQ99LF4 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RtcbQ99LF4 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC17.52■□□□□ 0.4
RtcbQ99LF4 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC17.52■□□□□ 0.4
RtcbQ99LF4 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RtcbQ99LF4 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RtcbQ99LF4 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RtcbQ99LF4 Gm7553-201ENSMUST00000185805 1426 ntBASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms