Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Cstf1Q99LC2 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cstf1Q99LC2 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cstf1Q99LC2 Gm12390-201ENSMUST00000117897 397 ntBASIC14.28□□□□□ -0.12
Cstf1Q99LC2 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
Cstf1Q99LC2 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cstf1Q99LC2 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC14.28□□□□□ -0.12
Cstf1Q99LC2 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cstf1Q99LC2 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.28□□□□□ -0.12
Cstf1Q99LC2 Gm33320-201ENSMUST00000192232 530 ntBASIC14.28□□□□□ -0.12
Cstf1Q99LC2 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.28□□□□□ -0.12
Cstf1Q99LC2 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Cstf1Q99LC2 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Cstf1Q99LC2 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cstf1Q99LC2 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cstf1Q99LC2 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cstf1Q99LC2 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cstf1Q99LC2 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cstf1Q99LC2 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
Cstf1Q99LC2 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cstf1Q99LC2 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cstf1Q99LC2 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cstf1Q99LC2 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cstf1Q99LC2 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cstf1Q99LC2 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cstf1Q99LC2 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cstf1Q99LC2 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cstf1Q99LC2 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cstf1Q99LC2 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cstf1Q99LC2 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Cstf1Q99LC2 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.27□□□□□ -0.12
Cstf1Q99LC2 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cstf1Q99LC2 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cstf1Q99LC2 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cstf1Q99LC2 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cstf1Q99LC2 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Cstf1Q99LC2 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.27□□□□□ -0.12
Cstf1Q99LC2 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cstf1Q99LC2 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.27□□□□□ -0.12
Cstf1Q99LC2 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cstf1Q99LC2 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Cstf1Q99LC2 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cstf1Q99LC2 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Cstf1Q99LC2 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Cstf1Q99LC2 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cstf1Q99LC2 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cstf1Q99LC2 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cstf1Q99LC2 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cstf1Q99LC2 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cstf1Q99LC2 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Cstf1Q99LC2 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Cstf1Q99LC2 AA619741-201ENSMUST00000195095 646 ntBASIC14.27□□□□□ -0.13
Cstf1Q99LC2 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC14.27□□□□□ -0.13
Cstf1Q99LC2 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC14.27□□□□□ -0.13
Cstf1Q99LC2 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cstf1Q99LC2 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cstf1Q99LC2 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cstf1Q99LC2 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cstf1Q99LC2 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cstf1Q99LC2 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cstf1Q99LC2 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cstf1Q99LC2 AC163637.1-201ENSMUST00000215491 1894 ntBASIC14.27□□□□□ -0.13
Cstf1Q99LC2 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cstf1Q99LC2 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC14.27□□□□□ -0.13
Cstf1Q99LC2 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cstf1Q99LC2 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC14.26□□□□□ -0.13
Cstf1Q99LC2 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cstf1Q99LC2 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cstf1Q99LC2 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cstf1Q99LC2 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Cstf1Q99LC2 Gm9816-201ENSMUST00000122292 1414 ntBASIC14.26□□□□□ -0.13
Cstf1Q99LC2 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC14.26□□□□□ -0.13
Cstf1Q99LC2 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.26□□□□□ -0.13
Cstf1Q99LC2 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cstf1Q99LC2 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cstf1Q99LC2 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cstf1Q99LC2 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC14.26□□□□□ -0.13
Cstf1Q99LC2 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cstf1Q99LC2 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC14.26□□□□□ -0.13
Cstf1Q99LC2 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Cstf1Q99LC2 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.26□□□□□ -0.13
Cstf1Q99LC2 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC14.26□□□□□ -0.13
Cstf1Q99LC2 Gm2451-201ENSMUST00000199447 999 ntBASIC14.26□□□□□ -0.13
Cstf1Q99LC2 Gm10290-201ENSMUST00000200451 999 ntBASIC14.26□□□□□ -0.13
Cstf1Q99LC2 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cstf1Q99LC2 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cstf1Q99LC2 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cstf1Q99LC2 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Cstf1Q99LC2 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cstf1Q99LC2 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
Cstf1Q99LC2 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cstf1Q99LC2 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cstf1Q99LC2 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cstf1Q99LC2 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cstf1Q99LC2 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.25□□□□□ -0.13
Cstf1Q99LC2 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cstf1Q99LC2 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cstf1Q99LC2 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Cstf1Q99LC2 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Cstf1Q99LC2 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms