Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC16.84■□□□□ 0.29
Col20a1Q923P0 Gm15823-201ENSMUST00000064305 670 ntBASIC16.84■□□□□ 0.29
Col20a1Q923P0 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col20a1Q923P0 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Col20a1Q923P0 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col20a1Q923P0 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col20a1Q923P0 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Col20a1Q923P0 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Col20a1Q923P0 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Col20a1Q923P0 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Col20a1Q923P0 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.29
Col20a1Q923P0 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Col20a1Q923P0 Gm45133-201ENSMUST00000207548 2773 ntBASIC16.83■□□□□ 0.29
Col20a1Q923P0 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col20a1Q923P0 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col20a1Q923P0 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col20a1Q923P0 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Col20a1Q923P0 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Col20a1Q923P0 Gm14928-201ENSMUST00000120198 477 ntBASIC16.83■□□□□ 0.28
Col20a1Q923P0 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC16.83■□□□□ 0.28
Col20a1Q923P0 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC16.83■□□□□ 0.28
Col20a1Q923P0 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col20a1Q923P0 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC16.83■□□□□ 0.28
Col20a1Q923P0 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC16.83■□□□□ 0.28
Col20a1Q923P0 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Col20a1Q923P0 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Col20a1Q923P0 Gm37917-201ENSMUST00000194711 392 ntBASIC16.83■□□□□ 0.28
Col20a1Q923P0 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC16.83■□□□□ 0.28
Col20a1Q923P0 Gm18027-201ENSMUST00000218947 619 ntBASIC16.83■□□□□ 0.28
Col20a1Q923P0 Gm19220-201ENSMUST00000222682 803 ntBASIC16.83■□□□□ 0.28
Col20a1Q923P0 AC139580.1-202ENSMUST00000223574 928 ntBASIC16.83■□□□□ 0.28
Col20a1Q923P0 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col20a1Q923P0 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col20a1Q923P0 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col20a1Q923P0 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Col20a1Q923P0 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col20a1Q923P0 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Col20a1Q923P0 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col20a1Q923P0 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC16.83■□□□□ 0.28
Col20a1Q923P0 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col20a1Q923P0 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col20a1Q923P0 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Col20a1Q923P0 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col20a1Q923P0 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Col20a1Q923P0 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col20a1Q923P0 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC16.82■□□□□ 0.28
Col20a1Q923P0 Gm14452-201ENSMUST00000118680 1632 ntBASIC16.82■□□□□ 0.28
Col20a1Q923P0 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col20a1Q923P0 Gm12490-201ENSMUST00000120255 560 ntBASIC16.82■□□□□ 0.28
Col20a1Q923P0 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col20a1Q923P0 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Col20a1Q923P0 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC16.82■□□□□ 0.28
Col20a1Q923P0 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Col20a1Q923P0 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC16.82■□□□□ 0.28
Col20a1Q923P0 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Col20a1Q923P0 Gm18018-201ENSMUST00000198273 408 ntBASIC16.82■□□□□ 0.28
Col20a1Q923P0 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC16.82■□□□□ 0.28
Col20a1Q923P0 Gm45668-201ENSMUST00000211271 493 ntBASIC16.82■□□□□ 0.28
Col20a1Q923P0 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col20a1Q923P0 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Col20a1Q923P0 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col20a1Q923P0 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Col20a1Q923P0 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col20a1Q923P0 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC16.82■□□□□ 0.28
Col20a1Q923P0 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col20a1Q923P0 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col20a1Q923P0 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col20a1Q923P0 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col20a1Q923P0 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col20a1Q923P0 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col20a1Q923P0 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col20a1Q923P0 Ssr1-204ENSMUST00000225319 1610 ntBASIC16.81■□□□□ 0.28
Col20a1Q923P0 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Col20a1Q923P0 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Col20a1Q923P0 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Col20a1Q923P0 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col20a1Q923P0 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC16.81■□□□□ 0.28
Col20a1Q923P0 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Col20a1Q923P0 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Col20a1Q923P0 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Col20a1Q923P0 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Col20a1Q923P0 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC16.81■□□□□ 0.28
Col20a1Q923P0 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC16.81■□□□□ 0.28
Col20a1Q923P0 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
Col20a1Q923P0 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Col20a1Q923P0 Ighv5-13-201ENSMUST00000193550 290 ntBASIC16.81■□□□□ 0.28
Col20a1Q923P0 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col20a1Q923P0 Gm7653-201ENSMUST00000214567 508 ntBASIC16.81■□□□□ 0.28
Col20a1Q923P0 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col20a1Q923P0 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col20a1Q923P0 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col20a1Q923P0 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col20a1Q923P0 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Col20a1Q923P0 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col20a1Q923P0 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col20a1Q923P0 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col20a1Q923P0 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col20a1Q923P0 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col20a1Q923P0 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Col20a1Q923P0 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms