Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdha8Q91Y12 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdha8Q91Y12 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdha8Q91Y12 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdha8Q91Y12 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdha8Q91Y12 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Pcdha8Q91Y12 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdha8Q91Y12 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Pcdha8Q91Y12 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
Pcdha8Q91Y12 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Pcdha8Q91Y12 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdha8Q91Y12 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
Pcdha8Q91Y12 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdha8Q91Y12 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.95□□□□□ -0.18
Pcdha8Q91Y12 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdha8Q91Y12 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC13.95□□□□□ -0.18
Pcdha8Q91Y12 Gm37230-201ENSMUST00000194491 818 ntBASIC13.95□□□□□ -0.18
Pcdha8Q91Y12 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC13.95□□□□□ -0.18
Pcdha8Q91Y12 Gm18057-201ENSMUST00000208220 503 ntBASIC13.95□□□□□ -0.18
Pcdha8Q91Y12 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC13.95□□□□□ -0.18
Pcdha8Q91Y12 AC155729.1-201ENSMUST00000227758 544 ntBASIC13.95□□□□□ -0.18
Pcdha8Q91Y12 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdha8Q91Y12 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Pcdha8Q91Y12 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdha8Q91Y12 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdha8Q91Y12 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdha8Q91Y12 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdha8Q91Y12 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdha8Q91Y12 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdha8Q91Y12 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdha8Q91Y12 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Pcdha8Q91Y12 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
Pcdha8Q91Y12 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdha8Q91Y12 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdha8Q91Y12 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdha8Q91Y12 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdha8Q91Y12 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdha8Q91Y12 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdha8Q91Y12 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdha8Q91Y12 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdha8Q91Y12 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdha8Q91Y12 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdha8Q91Y12 Rprl2-201ENSMUST00000157150 290 ntBASIC13.94□□□□□ -0.18
Pcdha8Q91Y12 Gm27494-201ENSMUST00000184735 189 ntBASIC13.94□□□□□ -0.18
Pcdha8Q91Y12 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdha8Q91Y12 Gm5628-201ENSMUST00000222318 1049 ntBASIC13.94□□□□□ -0.18
Pcdha8Q91Y12 AC131187.1-201ENSMUST00000224567 809 ntBASIC13.94□□□□□ -0.18
Pcdha8Q91Y12 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.94□□□□□ -0.18
Pcdha8Q91Y12 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdha8Q91Y12 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdha8Q91Y12 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdha8Q91Y12 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdha8Q91Y12 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdha8Q91Y12 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.94□□□□□ -0.18
Pcdha8Q91Y12 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdha8Q91Y12 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdha8Q91Y12 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdha8Q91Y12 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdha8Q91Y12 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Pcdha8Q91Y12 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Pcdha8Q91Y12 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Pcdha8Q91Y12 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdha8Q91Y12 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdha8Q91Y12 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Pcdha8Q91Y12 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Pcdha8Q91Y12 Gm9252-201ENSMUST00000172364 1602 ntBASIC13.93□□□□□ -0.18
Pcdha8Q91Y12 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Pcdha8Q91Y12 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Pcdha8Q91Y12 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Pcdha8Q91Y12 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdha8Q91Y12 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Pcdha8Q91Y12 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdha8Q91Y12 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdha8Q91Y12 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdha8Q91Y12 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Pcdha8Q91Y12 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdha8Q91Y12 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdha8Q91Y12 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdha8Q91Y12 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdha8Q91Y12 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC13.93□□□□□ -0.18
Pcdha8Q91Y12 Gm4995-201ENSMUST00000117247 432 ntBASIC13.93□□□□□ -0.18
Pcdha8Q91Y12 Mir1895-201ENSMUST00000122615 79 ntBASIC13.93□□□□□ -0.18
Pcdha8Q91Y12 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC13.93□□□□□ -0.18
Pcdha8Q91Y12 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdha8Q91Y12 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC13.93□□□□□ -0.18
Pcdha8Q91Y12 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
Pcdha8Q91Y12 AC225888.1-201ENSMUST00000227184 728 ntBASIC13.93□□□□□ -0.18
Pcdha8Q91Y12 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdha8Q91Y12 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC13.93□□□□□ -0.18
Pcdha8Q91Y12 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdha8Q91Y12 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdha8Q91Y12 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.93□□□□□ -0.18
Pcdha8Q91Y12 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Pcdha8Q91Y12 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdha8Q91Y12 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdha8Q91Y12 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Pcdha8Q91Y12 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdha8Q91Y12 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Pcdha8Q91Y12 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdha8Q91Y12 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms