Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb1Q91Y08 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb1Q91Y08 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb1Q91Y08 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb1Q91Y08 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb1Q91Y08 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb1Q91Y08 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb1Q91Y08 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Pcdhb1Q91Y08 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb1Q91Y08 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Pcdhb1Q91Y08 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb1Q91Y08 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb1Q91Y08 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb1Q91Y08 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb1Q91Y08 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb1Q91Y08 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
Pcdhb1Q91Y08 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb1Q91Y08 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb1Q91Y08 Gm14822-201ENSMUST00000122247 291 ntBASIC14.87□□□□□ -0.03
Pcdhb1Q91Y08 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb1Q91Y08 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC14.87□□□□□ -0.03
Pcdhb1Q91Y08 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb1Q91Y08 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC14.87□□□□□ -0.03
Pcdhb1Q91Y08 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb1Q91Y08 Gm2756-201ENSMUST00000195851 400 ntBASIC14.87□□□□□ -0.03
Pcdhb1Q91Y08 Gm44335-201ENSMUST00000196879 141 ntBASIC14.87□□□□□ -0.03
Pcdhb1Q91Y08 Gm44297-201ENSMUST00000198304 141 ntBASIC14.87□□□□□ -0.03
Pcdhb1Q91Y08 Gm44346-201ENSMUST00000198851 141 ntBASIC14.87□□□□□ -0.03
Pcdhb1Q91Y08 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb1Q91Y08 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Pcdhb1Q91Y08 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
Pcdhb1Q91Y08 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb1Q91Y08 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb1Q91Y08 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb1Q91Y08 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb1Q91Y08 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb1Q91Y08 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.87□□□□□ -0.03
Pcdhb1Q91Y08 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC14.87□□□□□ -0.03
Pcdhb1Q91Y08 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.87□□□□□ -0.03
Pcdhb1Q91Y08 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb1Q91Y08 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb1Q91Y08 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Pcdhb1Q91Y08 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb1Q91Y08 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
Pcdhb1Q91Y08 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb1Q91Y08 Gm38102-201ENSMUST00000192791 1935 ntBASIC14.86□□□□□ -0.03
Pcdhb1Q91Y08 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb1Q91Y08 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb1Q91Y08 Gm9109-201ENSMUST00000120254 1405 ntBASIC14.86□□□□□ -0.03
Pcdhb1Q91Y08 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb1Q91Y08 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb1Q91Y08 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Pcdhb1Q91Y08 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.86□□□□□ -0.03
Pcdhb1Q91Y08 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb1Q91Y08 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb1Q91Y08 Gm13015-201ENSMUST00000118674 204 ntBASIC14.86□□□□□ -0.03
Pcdhb1Q91Y08 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Pcdhb1Q91Y08 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC14.86□□□□□ -0.03
Pcdhb1Q91Y08 Gm8584-201ENSMUST00000171982 758 ntBASIC14.86□□□□□ -0.03
Pcdhb1Q91Y08 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC14.86□□□□□ -0.03
Pcdhb1Q91Y08 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC14.86□□□□□ -0.03
Pcdhb1Q91Y08 Gm9824-201ENSMUST00000178707 561 ntBASIC14.86□□□□□ -0.03
Pcdhb1Q91Y08 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb1Q91Y08 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Pcdhb1Q91Y08 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Pcdhb1Q91Y08 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb1Q91Y08 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb1Q91Y08 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb1Q91Y08 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb1Q91Y08 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC14.86□□□□□ -0.03
Pcdhb1Q91Y08 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb1Q91Y08 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb1Q91Y08 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb1Q91Y08 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Pcdhb1Q91Y08 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.85□□□□□ -0.03
Pcdhb1Q91Y08 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Pcdhb1Q91Y08 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb1Q91Y08 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC14.85□□□□□ -0.03
Pcdhb1Q91Y08 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb1Q91Y08 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb1Q91Y08 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb1Q91Y08 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb1Q91Y08 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb1Q91Y08 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb1Q91Y08 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb1Q91Y08 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC14.85□□□□□ -0.03
Pcdhb1Q91Y08 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb1Q91Y08 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb1Q91Y08 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Pcdhb1Q91Y08 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb1Q91Y08 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Pcdhb1Q91Y08 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb1Q91Y08 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb1Q91Y08 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb1Q91Y08 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb1Q91Y08 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
Pcdhb1Q91Y08 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb1Q91Y08 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
Pcdhb1Q91Y08 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb1Q91Y08 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms