Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
Pcdhb20Q91XZ9 Vmn1r169-201ENSMUST00000170290 915 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Pcdhb20Q91XZ9 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC14.08□□□□□ -0.16
Pcdhb20Q91XZ9 Gm20778-201ENSMUST00000178524 627 ntBASIC14.08□□□□□ -0.16
Pcdhb20Q91XZ9 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.08□□□□□ -0.16
Pcdhb20Q91XZ9 Gm18348-201ENSMUST00000191227 820 ntBASIC14.08□□□□□ -0.16
Pcdhb20Q91XZ9 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC14.08□□□□□ -0.16
Pcdhb20Q91XZ9 Gm45098-201ENSMUST00000207179 657 ntBASIC14.08□□□□□ -0.16
Pcdhb20Q91XZ9 Olfr1468-ps1-201ENSMUST00000207287 1208 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Pcdhb20Q91XZ9 Gm44872-201ENSMUST00000207864 420 ntBASIC14.08□□□□□ -0.16
Pcdhb20Q91XZ9 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC14.08□□□□□ -0.16
Pcdhb20Q91XZ9 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb20Q91XZ9 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb20Q91XZ9 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb20Q91XZ9 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb20Q91XZ9 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb20Q91XZ9 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb20Q91XZ9 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.08□□□□□ -0.16
Pcdhb20Q91XZ9 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb20Q91XZ9 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb20Q91XZ9 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb20Q91XZ9 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb20Q91XZ9 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.07□□□□□ -0.16
Pcdhb20Q91XZ9 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb20Q91XZ9 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC14.07□□□□□ -0.16
Pcdhb20Q91XZ9 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb20Q91XZ9 Olfr23-202ENSMUST00000214210 2527 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Pcdhb20Q91XZ9 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Pcdhb20Q91XZ9 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb20Q91XZ9 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb20Q91XZ9 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb20Q91XZ9 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb20Q91XZ9 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb20Q91XZ9 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb20Q91XZ9 Gm15719-201ENSMUST00000120619 635 ntBASIC14.07□□□□□ -0.16
Pcdhb20Q91XZ9 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.07□□□□□ -0.16
Pcdhb20Q91XZ9 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb20Q91XZ9 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb20Q91XZ9 Tcstv1-201ENSMUST00000178510 1280 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Pcdhb20Q91XZ9 Gm9726-201ENSMUST00000180321 678 ntBASIC14.07□□□□□ -0.16
Pcdhb20Q91XZ9 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb20Q91XZ9 Gm42947-201ENSMUST00000198230 675 ntTSL 2 BASIC14.07□□□□□ -0.16
Pcdhb20Q91XZ9 Gm18049-201ENSMUST00000208909 581 ntBASIC14.07□□□□□ -0.16
Pcdhb20Q91XZ9 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb20Q91XZ9 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb20Q91XZ9 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb20Q91XZ9 Olfr282-204ENSMUST00000215320 1573 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Pcdhb20Q91XZ9 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb20Q91XZ9 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.07□□□□□ -0.16
Pcdhb20Q91XZ9 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb20Q91XZ9 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
Pcdhb20Q91XZ9 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb20Q91XZ9 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.07□□□□□ -0.16
Pcdhb20Q91XZ9 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
Pcdhb20Q91XZ9 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb20Q91XZ9 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb20Q91XZ9 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb20Q91XZ9 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb20Q91XZ9 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
Pcdhb20Q91XZ9 Hormad1-204ENSMUST00000171191 1437 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb20Q91XZ9 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb20Q91XZ9 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb20Q91XZ9 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb20Q91XZ9 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb20Q91XZ9 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb20Q91XZ9 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb20Q91XZ9 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Pcdhb20Q91XZ9 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb20Q91XZ9 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Pcdhb20Q91XZ9 Gm24590-201ENSMUST00000116699 119 ntBASIC14.06□□□□□ -0.16
Pcdhb20Q91XZ9 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb20Q91XZ9 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC14.06□□□□□ -0.16
Pcdhb20Q91XZ9 Gm12278-201ENSMUST00000153718 407 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb20Q91XZ9 4930486I03Rik-201ENSMUST00000161509 788 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb20Q91XZ9 Mnd1-ps-201ENSMUST00000162462 604 ntBASIC14.06□□□□□ -0.16
Pcdhb20Q91XZ9 Gm25948-201ENSMUST00000175334 112 ntBASIC14.06□□□□□ -0.16
Pcdhb20Q91XZ9 9930120I10Rik-201ENSMUST00000203027 865 ntBASIC14.06□□□□□ -0.16
Pcdhb20Q91XZ9 Gm9182-201ENSMUST00000217829 639 ntBASIC14.06□□□□□ -0.16
Pcdhb20Q91XZ9 Gm17611-202ENSMUST00000220613 814 ntBASIC14.06□□□□□ -0.16
Pcdhb20Q91XZ9 AC139382.1-201ENSMUST00000221402 498 ntBASIC14.06□□□□□ -0.16
Pcdhb20Q91XZ9 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb20Q91XZ9 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb20Q91XZ9 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb20Q91XZ9 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb20Q91XZ9 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Pcdhb20Q91XZ9 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Pcdhb20Q91XZ9 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
Pcdhb20Q91XZ9 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb20Q91XZ9 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb20Q91XZ9 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb20Q91XZ9 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb20Q91XZ9 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb20Q91XZ9 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Pcdhb20Q91XZ9 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Pcdhb20Q91XZ9 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb20Q91XZ9 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.06□□□□□ -0.16
Pcdhb20Q91XZ9 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb20Q91XZ9 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC14.06□□□□□ -0.16
Pcdhb20Q91XZ9 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC14.06□□□□□ -0.16
Pcdhb20Q91XZ9 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms