Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb3Q91XZ7 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb3Q91XZ7 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Pcdhb3Q91XZ7 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb3Q91XZ7 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC14.36□□□□□ -0.11
Pcdhb3Q91XZ7 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb3Q91XZ7 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
Pcdhb3Q91XZ7 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Pcdhb3Q91XZ7 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb3Q91XZ7 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Pcdhb3Q91XZ7 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb3Q91XZ7 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Pcdhb3Q91XZ7 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb3Q91XZ7 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb3Q91XZ7 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Pcdhb3Q91XZ7 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb3Q91XZ7 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Pcdhb3Q91XZ7 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb3Q91XZ7 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.35□□□□□ -0.11
Pcdhb3Q91XZ7 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Pcdhb3Q91XZ7 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb3Q91XZ7 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb3Q91XZ7 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Pcdhb3Q91XZ7 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Pcdhb3Q91XZ7 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC14.35□□□□□ -0.11
Pcdhb3Q91XZ7 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC14.35□□□□□ -0.11
Pcdhb3Q91XZ7 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb3Q91XZ7 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.35□□□□□ -0.11
Pcdhb3Q91XZ7 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC14.35□□□□□ -0.11
Pcdhb3Q91XZ7 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb3Q91XZ7 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC14.35□□□□□ -0.11
Pcdhb3Q91XZ7 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC14.35□□□□□ -0.11
Pcdhb3Q91XZ7 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb3Q91XZ7 AU017674-201ENSMUST00000222864 720 ntTSL 3 BASIC14.35□□□□□ -0.11
Pcdhb3Q91XZ7 AC159093.1-201ENSMUST00000227779 380 ntBASIC14.35□□□□□ -0.11
Pcdhb3Q91XZ7 Crisp4-201ENSMUST00000026876 1252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb3Q91XZ7 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Pcdhb3Q91XZ7 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.35□□□□□ -0.11
Pcdhb3Q91XZ7 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.35□□□□□ -0.11
Pcdhb3Q91XZ7 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb3Q91XZ7 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Pcdhb3Q91XZ7 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb3Q91XZ7 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb3Q91XZ7 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb3Q91XZ7 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb3Q91XZ7 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.35□□□□□ -0.11
Pcdhb3Q91XZ7 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb3Q91XZ7 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb3Q91XZ7 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb3Q91XZ7 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb3Q91XZ7 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb3Q91XZ7 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.34□□□□□ -0.11
Pcdhb3Q91XZ7 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb3Q91XZ7 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb3Q91XZ7 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb3Q91XZ7 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Pcdhb3Q91XZ7 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb3Q91XZ7 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb3Q91XZ7 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb3Q91XZ7 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb3Q91XZ7 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Pcdhb3Q91XZ7 Gm13263-201ENSMUST00000121271 838 ntBASIC14.34□□□□□ -0.11
Pcdhb3Q91XZ7 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC14.34□□□□□ -0.11
Pcdhb3Q91XZ7 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Pcdhb3Q91XZ7 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC14.34□□□□□ -0.11
Pcdhb3Q91XZ7 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb3Q91XZ7 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC14.34□□□□□ -0.11
Pcdhb3Q91XZ7 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC14.34□□□□□ -0.11
Pcdhb3Q91XZ7 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb3Q91XZ7 Gm5364-201ENSMUST00000216789 889 ntBASIC14.34□□□□□ -0.11
Pcdhb3Q91XZ7 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Pcdhb3Q91XZ7 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb3Q91XZ7 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Pcdhb3Q91XZ7 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb3Q91XZ7 Gm27196-201ENSMUST00000184787 2582 ntBASIC14.34□□□□□ -0.11
Pcdhb3Q91XZ7 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb3Q91XZ7 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb3Q91XZ7 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb3Q91XZ7 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb3Q91XZ7 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.34□□□□□ -0.11
Pcdhb3Q91XZ7 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb3Q91XZ7 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Pcdhb3Q91XZ7 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb3Q91XZ7 Gm3928-201ENSMUST00000121141 1307 ntBASIC14.34□□□□□ -0.11
Pcdhb3Q91XZ7 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb3Q91XZ7 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Pcdhb3Q91XZ7 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb3Q91XZ7 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Pcdhb3Q91XZ7 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb3Q91XZ7 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb3Q91XZ7 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb3Q91XZ7 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb3Q91XZ7 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb3Q91XZ7 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb3Q91XZ7 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb3Q91XZ7 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.11
Pcdhb3Q91XZ7 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdhb3Q91XZ7 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdhb3Q91XZ7 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdhb3Q91XZ7 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms