Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhga11Q91XY8 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhga11Q91XY8 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhga11Q91XY8 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC13.86□□□□□ -0.19
Pcdhga11Q91XY8 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhga11Q91XY8 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13.86□□□□□ -0.19
Pcdhga11Q91XY8 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.86□□□□□ -0.19
Pcdhga11Q91XY8 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.86□□□□□ -0.19
Pcdhga11Q91XY8 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.86□□□□□ -0.19
Pcdhga11Q91XY8 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhga11Q91XY8 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhga11Q91XY8 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC13.86□□□□□ -0.19
Pcdhga11Q91XY8 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhga11Q91XY8 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhga11Q91XY8 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhga11Q91XY8 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Pcdhga11Q91XY8 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.85□□□□□ -0.19
Pcdhga11Q91XY8 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
Pcdhga11Q91XY8 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhga11Q91XY8 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhga11Q91XY8 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhga11Q91XY8 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhga11Q91XY8 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhga11Q91XY8 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhga11Q91XY8 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Pcdhga11Q91XY8 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Pcdhga11Q91XY8 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhga11Q91XY8 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhga11Q91XY8 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhga11Q91XY8 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhga11Q91XY8 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Pcdhga11Q91XY8 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhga11Q91XY8 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Pcdhga11Q91XY8 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Pcdhga11Q91XY8 Gm45098-201ENSMUST00000207179 657 ntBASIC13.85□□□□□ -0.19
Pcdhga11Q91XY8 Gm7229-201ENSMUST00000214719 1007 ntBASIC13.85□□□□□ -0.19
Pcdhga11Q91XY8 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhga11Q91XY8 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhga11Q91XY8 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
Pcdhga11Q91XY8 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhga11Q91XY8 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhga11Q91XY8 Gm5422-201ENSMUST00000050717 2721 ntBASIC13.85□□□□□ -0.19
Pcdhga11Q91XY8 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhga11Q91XY8 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhga11Q91XY8 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhga11Q91XY8 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhga11Q91XY8 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC13.85□□□□□ -0.19
Pcdhga11Q91XY8 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.85□□□□□ -0.19
Pcdhga11Q91XY8 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhga11Q91XY8 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhga11Q91XY8 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhga11Q91XY8 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhga11Q91XY8 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Pcdhga11Q91XY8 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhga11Q91XY8 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhga11Q91XY8 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.84□□□□□ -0.19
Pcdhga11Q91XY8 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Pcdhga11Q91XY8 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Pcdhga11Q91XY8 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC13.84□□□□□ -0.19
Pcdhga11Q91XY8 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC13.84□□□□□ -0.19
Pcdhga11Q91XY8 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhga11Q91XY8 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
Pcdhga11Q91XY8 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhga11Q91XY8 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhga11Q91XY8 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhga11Q91XY8 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhga11Q91XY8 Gm9252-201ENSMUST00000172364 1602 ntBASIC13.84□□□□□ -0.19
Pcdhga11Q91XY8 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC13.84□□□□□ -0.19
Pcdhga11Q91XY8 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhga11Q91XY8 Gm4995-201ENSMUST00000117247 432 ntBASIC13.84□□□□□ -0.19
Pcdhga11Q91XY8 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Pcdhga11Q91XY8 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
Pcdhga11Q91XY8 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC13.84□□□□□ -0.19
Pcdhga11Q91XY8 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
Pcdhga11Q91XY8 Gm43575-201ENSMUST00000196420 516 ntBASIC13.84□□□□□ -0.19
Pcdhga11Q91XY8 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Pcdhga11Q91XY8 Bloc1s5-203ENSMUST00000224902 612 ntBASIC13.84□□□□□ -0.19
Pcdhga11Q91XY8 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhga11Q91XY8 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhga11Q91XY8 Gm10175-201ENSMUST00000086013 645 ntBASIC13.84□□□□□ -0.19
Pcdhga11Q91XY8 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhga11Q91XY8 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Pcdhga11Q91XY8 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhga11Q91XY8 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Pcdhga11Q91XY8 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Pcdhga11Q91XY8 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhga11Q91XY8 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
Pcdhga11Q91XY8 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhga11Q91XY8 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhga11Q91XY8 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhga11Q91XY8 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
Pcdhga11Q91XY8 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
Pcdhga11Q91XY8 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Pcdhga11Q91XY8 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
Pcdhga11Q91XY8 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhga11Q91XY8 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhga11Q91XY8 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
Pcdhga11Q91XY8 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhga11Q91XY8 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhga11Q91XY8 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms