Protein–RNA interactions for Protein: Q91VR5

Ddx1, ATP-dependent RNA helicase DDX1, mousemouse

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx1Q91VR5 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx1Q91VR5 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx1Q91VR5 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx1Q91VR5 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Ddx1Q91VR5 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx1Q91VR5 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
Ddx1Q91VR5 Gm6756-201ENSMUST00000180647 1620 ntBASIC14.79□□□□□ -0.04
Ddx1Q91VR5 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx1Q91VR5 Gm27618-201ENSMUST00000183671 60 ntBASIC14.79□□□□□ -0.04
Ddx1Q91VR5 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx1Q91VR5 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx1Q91VR5 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx1Q91VR5 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Ddx1Q91VR5 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC14.79□□□□□ -0.04
Ddx1Q91VR5 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC14.79□□□□□ -0.04
Ddx1Q91VR5 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.79□□□□□ -0.04
Ddx1Q91VR5 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Ddx1Q91VR5 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx1Q91VR5 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx1Q91VR5 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx1Q91VR5 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx1Q91VR5 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.79□□□□□ -0.04
Ddx1Q91VR5 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx1Q91VR5 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx1Q91VR5 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Ddx1Q91VR5 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.79□□□□□ -0.04
Ddx1Q91VR5 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx1Q91VR5 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx1Q91VR5 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx1Q91VR5 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx1Q91VR5 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx1Q91VR5 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx1Q91VR5 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx1Q91VR5 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.78□□□□□ -0.04
Ddx1Q91VR5 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx1Q91VR5 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx1Q91VR5 Gm6912-201ENSMUST00000117218 544 ntBASIC14.78□□□□□ -0.04
Ddx1Q91VR5 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.78□□□□□ -0.04
Ddx1Q91VR5 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
Ddx1Q91VR5 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx1Q91VR5 Ighv5-13-201ENSMUST00000193550 290 ntBASIC14.78□□□□□ -0.04
Ddx1Q91VR5 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx1Q91VR5 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC14.78□□□□□ -0.04
Ddx1Q91VR5 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14.78□□□□□ -0.04
Ddx1Q91VR5 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx1Q91VR5 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx1Q91VR5 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx1Q91VR5 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx1Q91VR5 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx1Q91VR5 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx1Q91VR5 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx1Q91VR5 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.78□□□□□ -0.04
Ddx1Q91VR5 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx1Q91VR5 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx1Q91VR5 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx1Q91VR5 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.78□□□□□ -0.04
Ddx1Q91VR5 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx1Q91VR5 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC14.77□□□□□ -0.04
Ddx1Q91VR5 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ddx1Q91VR5 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC14.77□□□□□ -0.04
Ddx1Q91VR5 Gm37411-201ENSMUST00000194180 2282 ntBASIC14.77□□□□□ -0.04
Ddx1Q91VR5 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ddx1Q91VR5 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ddx1Q91VR5 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Ddx1Q91VR5 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ddx1Q91VR5 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC14.77□□□□□ -0.05
Ddx1Q91VR5 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ddx1Q91VR5 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ddx1Q91VR5 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Ddx1Q91VR5 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ddx1Q91VR5 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ddx1Q91VR5 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ddx1Q91VR5 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ddx1Q91VR5 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ddx1Q91VR5 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Ddx1Q91VR5 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Ddx1Q91VR5 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ddx1Q91VR5 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Ddx1Q91VR5 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC14.77□□□□□ -0.05
Ddx1Q91VR5 Gm15222-202ENSMUST00000228667 1726 ntBASIC14.77□□□□□ -0.05
Ddx1Q91VR5 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ddx1Q91VR5 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ddx1Q91VR5 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Ddx1Q91VR5 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ddx1Q91VR5 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ddx1Q91VR5 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ddx1Q91VR5 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ddx1Q91VR5 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Ddx1Q91VR5 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ddx1Q91VR5 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Ddx1Q91VR5 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ddx1Q91VR5 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ddx1Q91VR5 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Ddx1Q91VR5 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ddx1Q91VR5 Gm6415-201ENSMUST00000118488 348 ntBASIC14.76□□□□□ -0.05
Ddx1Q91VR5 Gm12490-201ENSMUST00000120255 560 ntBASIC14.76□□□□□ -0.05
Ddx1Q91VR5 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC14.76□□□□□ -0.05
Ddx1Q91VR5 Gm9824-201ENSMUST00000178707 561 ntBASIC14.76□□□□□ -0.05
Ddx1Q91VR5 Gm25144-201ENSMUST00000179561 110 ntBASIC14.76□□□□□ -0.05
Ddx1Q91VR5 Gm25352-201ENSMUST00000179815 110 ntBASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms