Protein–RNA interactions for Protein: Q91VA1

Slc44a4, Choline transporter-like protein 4, mousemouse

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc44a4Q91VA1 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Slc44a4Q91VA1 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Slc44a4Q91VA1 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Slc44a4Q91VA1 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Slc44a4Q91VA1 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Slc44a4Q91VA1 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC16.75■□□□□ 0.27
Slc44a4Q91VA1 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Slc44a4Q91VA1 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Slc44a4Q91VA1 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Slc44a4Q91VA1 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC16.75■□□□□ 0.27
Slc44a4Q91VA1 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC16.75■□□□□ 0.27
Slc44a4Q91VA1 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Slc44a4Q91VA1 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC16.75■□□□□ 0.27
Slc44a4Q91VA1 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Slc44a4Q91VA1 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Slc44a4Q91VA1 Gm5356-201ENSMUST00000093326 615 ntBASIC16.75■□□□□ 0.27
Slc44a4Q91VA1 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Slc44a4Q91VA1 Gm9109-201ENSMUST00000120254 1405 ntBASIC16.75■□□□□ 0.27
Slc44a4Q91VA1 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC16.75■□□□□ 0.27
Slc44a4Q91VA1 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Slc44a4Q91VA1 Gm45212-201ENSMUST00000205831 3403 ntBASIC16.75■□□□□ 0.27
Slc44a4Q91VA1 AC154412.1-201ENSMUST00000226540 2786 ntBASIC16.75■□□□□ 0.27
Slc44a4Q91VA1 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slc44a4Q91VA1 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slc44a4Q91VA1 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slc44a4Q91VA1 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Slc44a4Q91VA1 Gm10605-202ENSMUST00000183019 3198 ntBASIC16.74■□□□□ 0.27
Slc44a4Q91VA1 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slc44a4Q91VA1 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slc44a4Q91VA1 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slc44a4Q91VA1 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slc44a4Q91VA1 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slc44a4Q91VA1 Gm27839-201ENSMUST00000184242 106 ntBASIC16.74■□□□□ 0.27
Slc44a4Q91VA1 Gm43630-201ENSMUST00000201550 776 ntBASIC16.74■□□□□ 0.27
Slc44a4Q91VA1 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC16.74■□□□□ 0.27
Slc44a4Q91VA1 Gm19078-201ENSMUST00000206311 727 ntBASIC16.74■□□□□ 0.27
Slc44a4Q91VA1 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC16.74■□□□□ 0.27
Slc44a4Q91VA1 Gm5425-201ENSMUST00000214125 459 ntBASIC16.74■□□□□ 0.27
Slc44a4Q91VA1 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
Slc44a4Q91VA1 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC16.74■□□□□ 0.27
Slc44a4Q91VA1 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slc44a4Q91VA1 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC16.74■□□□□ 0.27
Slc44a4Q91VA1 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slc44a4Q91VA1 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
Slc44a4Q91VA1 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slc44a4Q91VA1 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slc44a4Q91VA1 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Slc44a4Q91VA1 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slc44a4Q91VA1 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slc44a4Q91VA1 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Slc44a4Q91VA1 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Slc44a4Q91VA1 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Slc44a4Q91VA1 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC16.73■□□□□ 0.27
Slc44a4Q91VA1 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Slc44a4Q91VA1 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Slc44a4Q91VA1 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Slc44a4Q91VA1 AL645783.1-201ENSMUST00000221416 1832 ntBASIC16.73■□□□□ 0.27
Slc44a4Q91VA1 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Slc44a4Q91VA1 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Slc44a4Q91VA1 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC16.73■□□□□ 0.27
Slc44a4Q91VA1 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Slc44a4Q91VA1 Mir692-1-201ENSMUST00000102263 109 ntBASIC16.73■□□□□ 0.27
Slc44a4Q91VA1 Gm12390-201ENSMUST00000117897 397 ntBASIC16.73■□□□□ 0.27
Slc44a4Q91VA1 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC16.73■□□□□ 0.27
Slc44a4Q91VA1 Gm13385-201ENSMUST00000121089 220 ntBASIC16.73■□□□□ 0.27
Slc44a4Q91VA1 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC16.73■□□□□ 0.27
Slc44a4Q91VA1 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Slc44a4Q91VA1 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Slc44a4Q91VA1 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC16.73■□□□□ 0.27
Slc44a4Q91VA1 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC16.73■□□□□ 0.27
Slc44a4Q91VA1 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC16.73■□□□□ 0.27
Slc44a4Q91VA1 AC155729.1-201ENSMUST00000227758 544 ntBASIC16.73■□□□□ 0.27
Slc44a4Q91VA1 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Slc44a4Q91VA1 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Slc44a4Q91VA1 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Slc44a4Q91VA1 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Slc44a4Q91VA1 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Slc44a4Q91VA1 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Slc44a4Q91VA1 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Slc44a4Q91VA1 AC131068.2-201ENSMUST00000226175 1453 ntBASIC16.73■□□□□ 0.27
Slc44a4Q91VA1 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Slc44a4Q91VA1 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC16.73■□□□□ 0.27
Slc44a4Q91VA1 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Slc44a4Q91VA1 AC114008.2-201ENSMUST00000227699 1347 ntBASIC16.72■□□□□ 0.27
Slc44a4Q91VA1 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
Slc44a4Q91VA1 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Slc44a4Q91VA1 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Slc44a4Q91VA1 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Slc44a4Q91VA1 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Slc44a4Q91VA1 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Slc44a4Q91VA1 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Slc44a4Q91VA1 Ssr1-204ENSMUST00000225319 1610 ntBASIC16.72■□□□□ 0.27
Slc44a4Q91VA1 Gm4984-201ENSMUST00000115987 360 ntBASIC16.72■□□□□ 0.27
Slc44a4Q91VA1 Gm11557-201ENSMUST00000120200 1008 ntBASIC16.72■□□□□ 0.27
Slc44a4Q91VA1 Gm8927-201ENSMUST00000181978 981 ntBASIC16.72■□□□□ 0.27
Slc44a4Q91VA1 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC16.72■□□□□ 0.27
Slc44a4Q91VA1 Gm8463-201ENSMUST00000208573 613 ntBASIC16.72■□□□□ 0.27
Slc44a4Q91VA1 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Slc44a4Q91VA1 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC16.72■□□□□ 0.27
Slc44a4Q91VA1 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms