Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC12□□□□□ -0.49
H1fooQ8VIK3 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
H1fooQ8VIK3 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
H1fooQ8VIK3 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
H1fooQ8VIK3 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
H1fooQ8VIK3 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
H1fooQ8VIK3 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC12□□□□□ -0.49
H1fooQ8VIK3 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
H1fooQ8VIK3 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
H1fooQ8VIK3 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
H1fooQ8VIK3 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
H1fooQ8VIK3 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
H1fooQ8VIK3 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
H1fooQ8VIK3 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC12□□□□□ -0.49
H1fooQ8VIK3 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
H1fooQ8VIK3 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
H1fooQ8VIK3 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC12□□□□□ -0.49
H1fooQ8VIK3 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
H1fooQ8VIK3 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
H1fooQ8VIK3 Gm15467-201ENSMUST00000120582 445 ntBASIC12□□□□□ -0.49
H1fooQ8VIK3 Gm11543-201ENSMUST00000120758 370 ntBASIC12□□□□□ -0.49
H1fooQ8VIK3 Gm27920-201ENSMUST00000183953 96 ntBASIC12□□□□□ -0.49
H1fooQ8VIK3 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC12□□□□□ -0.49
H1fooQ8VIK3 CT030684.1-201ENSMUST00000227292 914 ntBASIC12□□□□□ -0.49
H1fooQ8VIK3 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
H1fooQ8VIK3 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
H1fooQ8VIK3 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
H1fooQ8VIK3 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC12□□□□□ -0.49
H1fooQ8VIK3 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC12□□□□□ -0.49
H1fooQ8VIK3 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC12□□□□□ -0.49
H1fooQ8VIK3 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC12□□□□□ -0.49
H1fooQ8VIK3 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
H1fooQ8VIK3 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC12□□□□□ -0.49
H1fooQ8VIK3 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
H1fooQ8VIK3 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
H1fooQ8VIK3 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
H1fooQ8VIK3 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC12□□□□□ -0.49
H1fooQ8VIK3 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
H1fooQ8VIK3 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC12□□□□□ -0.49
H1fooQ8VIK3 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC12□□□□□ -0.49
H1fooQ8VIK3 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC12□□□□□ -0.49
H1fooQ8VIK3 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
H1fooQ8VIK3 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
H1fooQ8VIK3 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
H1fooQ8VIK3 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC11.99□□□□□ -0.49
H1fooQ8VIK3 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
H1fooQ8VIK3 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
H1fooQ8VIK3 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
H1fooQ8VIK3 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
H1fooQ8VIK3 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
H1fooQ8VIK3 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
H1fooQ8VIK3 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
H1fooQ8VIK3 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
H1fooQ8VIK3 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC11.99□□□□□ -0.49
H1fooQ8VIK3 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
H1fooQ8VIK3 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
H1fooQ8VIK3 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC11.99□□□□□ -0.49
H1fooQ8VIK3 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC11.99□□□□□ -0.49
H1fooQ8VIK3 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
H1fooQ8VIK3 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
H1fooQ8VIK3 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
H1fooQ8VIK3 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
H1fooQ8VIK3 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
H1fooQ8VIK3 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
H1fooQ8VIK3 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
H1fooQ8VIK3 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC11.99□□□□□ -0.49
H1fooQ8VIK3 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
H1fooQ8VIK3 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
H1fooQ8VIK3 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
H1fooQ8VIK3 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
H1fooQ8VIK3 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
H1fooQ8VIK3 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
H1fooQ8VIK3 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
H1fooQ8VIK3 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
H1fooQ8VIK3 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
H1fooQ8VIK3 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
H1fooQ8VIK3 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
H1fooQ8VIK3 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC11.98□□□□□ -0.49
H1fooQ8VIK3 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
H1fooQ8VIK3 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
H1fooQ8VIK3 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
H1fooQ8VIK3 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
H1fooQ8VIK3 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
H1fooQ8VIK3 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
H1fooQ8VIK3 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
H1fooQ8VIK3 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
H1fooQ8VIK3 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC11.98□□□□□ -0.49
H1fooQ8VIK3 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC11.98□□□□□ -0.49
H1fooQ8VIK3 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
H1fooQ8VIK3 Gm6973-201ENSMUST00000117080 721 ntBASIC11.98□□□□□ -0.49
H1fooQ8VIK3 Gm11779-201ENSMUST00000118541 368 ntBASIC11.98□□□□□ -0.49
H1fooQ8VIK3 Gm14494-201ENSMUST00000118786 435 ntBASIC11.98□□□□□ -0.49
H1fooQ8VIK3 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC11.98□□□□□ -0.49
H1fooQ8VIK3 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC11.98□□□□□ -0.49
H1fooQ8VIK3 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC11.98□□□□□ -0.49
H1fooQ8VIK3 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
H1fooQ8VIK3 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC11.98□□□□□ -0.49
H1fooQ8VIK3 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
H1fooQ8VIK3 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC11.98□□□□□ -0.49
H1fooQ8VIK3 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms