Protein–RNA interactions for Protein: Q8VIJ6

Sfpq, Splicing factor, proline- and glutamine-rich, mousemouse

Known RBP Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SfpqQ8VIJ6 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SfpqQ8VIJ6 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SfpqQ8VIJ6 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SfpqQ8VIJ6 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
SfpqQ8VIJ6 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SfpqQ8VIJ6 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
SfpqQ8VIJ6 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SfpqQ8VIJ6 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
SfpqQ8VIJ6 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC15.11■□□□□ 0.01
SfpqQ8VIJ6 Gm13036-201ENSMUST00000117799 748 ntBASIC15.11■□□□□ 0.01
SfpqQ8VIJ6 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
SfpqQ8VIJ6 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
SfpqQ8VIJ6 Gm16026-204ENSMUST00000162652 683 ntBASIC15.11■□□□□ 0.01
SfpqQ8VIJ6 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SfpqQ8VIJ6 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SfpqQ8VIJ6 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SfpqQ8VIJ6 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
SfpqQ8VIJ6 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
SfpqQ8VIJ6 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
SfpqQ8VIJ6 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SfpqQ8VIJ6 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
SfpqQ8VIJ6 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SfpqQ8VIJ6 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
SfpqQ8VIJ6 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
SfpqQ8VIJ6 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
SfpqQ8VIJ6 Mmp14-206ENSMUST00000225641 3238 ntBASIC15.11■□□□□ 0.01
SfpqQ8VIJ6 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
SfpqQ8VIJ6 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SfpqQ8VIJ6 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SfpqQ8VIJ6 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SfpqQ8VIJ6 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SfpqQ8VIJ6 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SfpqQ8VIJ6 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SfpqQ8VIJ6 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
SfpqQ8VIJ6 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SfpqQ8VIJ6 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC15.1■□□□□ 0.01
SfpqQ8VIJ6 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SfpqQ8VIJ6 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SfpqQ8VIJ6 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SfpqQ8VIJ6 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SfpqQ8VIJ6 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC15.1■□□□□ 0.01
SfpqQ8VIJ6 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC15.1■□□□□ 0.01
SfpqQ8VIJ6 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC15.1■□□□□ 0.01
SfpqQ8VIJ6 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SfpqQ8VIJ6 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
SfpqQ8VIJ6 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
SfpqQ8VIJ6 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SfpqQ8VIJ6 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC15.1■□□□□ 0.01
SfpqQ8VIJ6 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SfpqQ8VIJ6 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SfpqQ8VIJ6 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC15.1■□□□□ 0.01
SfpqQ8VIJ6 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SfpqQ8VIJ6 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SfpqQ8VIJ6 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
SfpqQ8VIJ6 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
SfpqQ8VIJ6 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
SfpqQ8VIJ6 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
SfpqQ8VIJ6 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SfpqQ8VIJ6 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SfpqQ8VIJ6 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SfpqQ8VIJ6 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
SfpqQ8VIJ6 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SfpqQ8VIJ6 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SfpqQ8VIJ6 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SfpqQ8VIJ6 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SfpqQ8VIJ6 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SfpqQ8VIJ6 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SfpqQ8VIJ6 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SfpqQ8VIJ6 Gm9103-201ENSMUST00000119371 405 ntBASIC15.09■□□□□ 0.01
SfpqQ8VIJ6 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC15.09■□□□□ 0.01
SfpqQ8VIJ6 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC15.09■□□□□ 0.01
SfpqQ8VIJ6 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC15.09■□□□□ 0.01
SfpqQ8VIJ6 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC15.09■□□□□ 0.01
SfpqQ8VIJ6 Gm8584-201ENSMUST00000171982 758 ntBASIC15.09■□□□□ 0.01
SfpqQ8VIJ6 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC15.09■□□□□ 0.01
SfpqQ8VIJ6 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SfpqQ8VIJ6 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC15.09■□□□□ 0.01
SfpqQ8VIJ6 Gm10154-201ENSMUST00000084445 354 ntBASIC15.09■□□□□ 0.01
SfpqQ8VIJ6 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SfpqQ8VIJ6 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SfpqQ8VIJ6 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SfpqQ8VIJ6 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC15.09■□□□□ 0.01
SfpqQ8VIJ6 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC15.09■□□□□ 0.01
SfpqQ8VIJ6 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC15.09■□□□□ 0.01
SfpqQ8VIJ6 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
SfpqQ8VIJ6 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SfpqQ8VIJ6 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC15.09■□□□□ 0.01
SfpqQ8VIJ6 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0.01
SfpqQ8VIJ6 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC15.08■□□□□ 0.01
SfpqQ8VIJ6 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
SfpqQ8VIJ6 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
SfpqQ8VIJ6 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
SfpqQ8VIJ6 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0.01
SfpqQ8VIJ6 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
SfpqQ8VIJ6 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
SfpqQ8VIJ6 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
SfpqQ8VIJ6 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC15.08■□□□□ 0
SfpqQ8VIJ6 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
SfpqQ8VIJ6 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SfpqQ8VIJ6 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms