Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TraipQ8VIG6 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TraipQ8VIG6 Gm4081-201ENSMUST00000195287 1838 ntBASIC15.2■□□□□ 0.02
TraipQ8VIG6 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
TraipQ8VIG6 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TraipQ8VIG6 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TraipQ8VIG6 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TraipQ8VIG6 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TraipQ8VIG6 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TraipQ8VIG6 Gm12490-201ENSMUST00000120255 560 ntBASIC15.2■□□□□ 0.02
TraipQ8VIG6 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC15.2■□□□□ 0.02
TraipQ8VIG6 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TraipQ8VIG6 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TraipQ8VIG6 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC15.2■□□□□ 0.02
TraipQ8VIG6 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
TraipQ8VIG6 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC15.2■□□□□ 0.02
TraipQ8VIG6 AC154687.2-201ENSMUST00000223853 640 ntBASIC15.2■□□□□ 0.02
TraipQ8VIG6 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC15.2■□□□□ 0.02
TraipQ8VIG6 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TraipQ8VIG6 Gm14452-201ENSMUST00000118680 1632 ntBASIC15.2■□□□□ 0.02
TraipQ8VIG6 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TraipQ8VIG6 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TraipQ8VIG6 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
TraipQ8VIG6 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TraipQ8VIG6 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TraipQ8VIG6 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC15.2■□□□□ 0.02
TraipQ8VIG6 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC15.2■□□□□ 0.02
TraipQ8VIG6 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TraipQ8VIG6 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
TraipQ8VIG6 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TraipQ8VIG6 Fbxo40-202ENSMUST00000114806 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TraipQ8VIG6 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
TraipQ8VIG6 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
TraipQ8VIG6 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TraipQ8VIG6 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TraipQ8VIG6 Gm45212-201ENSMUST00000205831 3403 ntBASIC15.19■□□□□ 0.02
TraipQ8VIG6 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TraipQ8VIG6 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TraipQ8VIG6 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TraipQ8VIG6 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TraipQ8VIG6 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TraipQ8VIG6 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TraipQ8VIG6 Ssr1-204ENSMUST00000225319 1610 ntBASIC15.19■□□□□ 0.02
TraipQ8VIG6 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TraipQ8VIG6 Gm6912-201ENSMUST00000117218 544 ntBASIC15.19■□□□□ 0.02
TraipQ8VIG6 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC15.19■□□□□ 0.02
TraipQ8VIG6 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
TraipQ8VIG6 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TraipQ8VIG6 Gm37917-201ENSMUST00000194711 392 ntBASIC15.19■□□□□ 0.02
TraipQ8VIG6 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC15.19■□□□□ 0.02
TraipQ8VIG6 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
TraipQ8VIG6 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC15.19■□□□□ 0.02
TraipQ8VIG6 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TraipQ8VIG6 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TraipQ8VIG6 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TraipQ8VIG6 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TraipQ8VIG6 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TraipQ8VIG6 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TraipQ8VIG6 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TraipQ8VIG6 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TraipQ8VIG6 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TraipQ8VIG6 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TraipQ8VIG6 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
TraipQ8VIG6 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TraipQ8VIG6 Gm43339-201ENSMUST00000200032 1606 ntBASIC15.18■□□□□ 0.02
TraipQ8VIG6 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TraipQ8VIG6 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TraipQ8VIG6 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TraipQ8VIG6 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC15.18■□□□□ 0.02
TraipQ8VIG6 Gm14928-201ENSMUST00000120198 477 ntBASIC15.18■□□□□ 0.02
TraipQ8VIG6 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC15.18■□□□□ 0.02
TraipQ8VIG6 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TraipQ8VIG6 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC15.18■□□□□ 0.02
TraipQ8VIG6 Gm6473-201ENSMUST00000188572 1210 ntBASIC15.18■□□□□ 0.02
TraipQ8VIG6 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TraipQ8VIG6 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TraipQ8VIG6 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TraipQ8VIG6 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC15.18■□□□□ 0.02
TraipQ8VIG6 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC15.18■□□□□ 0.02
TraipQ8VIG6 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
TraipQ8VIG6 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC15.18■□□□□ 0.02
TraipQ8VIG6 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
TraipQ8VIG6 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TraipQ8VIG6 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TraipQ8VIG6 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TraipQ8VIG6 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TraipQ8VIG6 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TraipQ8VIG6 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TraipQ8VIG6 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TraipQ8VIG6 Carlr-201ENSMUST00000181515 2574 ntBASIC15.18■□□□□ 0.02
TraipQ8VIG6 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TraipQ8VIG6 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TraipQ8VIG6 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
TraipQ8VIG6 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TraipQ8VIG6 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TraipQ8VIG6 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TraipQ8VIG6 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC15.17■□□□□ 0.02
TraipQ8VIG6 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TraipQ8VIG6 Gm15240-201ENSMUST00000118156 720 ntBASIC15.17■□□□□ 0.02
TraipQ8VIG6 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms