Protein–RNA interactions for Protein: Q8VI88

Odf4, Outer dense fiber protein 4, mousemouse

Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Odf4Q8VI88 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Odf4Q8VI88 Gm13337-201ENSMUST00000119183 1594 ntBASIC12.86□□□□□ -0.35
Odf4Q8VI88 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Odf4Q8VI88 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Odf4Q8VI88 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Odf4Q8VI88 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Odf4Q8VI88 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Odf4Q8VI88 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Odf4Q8VI88 Gm7669-201ENSMUST00000210184 1603 ntBASIC12.85□□□□□ -0.35
Odf4Q8VI88 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Odf4Q8VI88 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Odf4Q8VI88 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Odf4Q8VI88 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Odf4Q8VI88 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Odf4Q8VI88 Prkcz2-201ENSMUST00000206136 1756 ntBASIC12.85□□□□□ -0.35
Odf4Q8VI88 Nrn1-204ENSMUST00000224323 1779 ntBASIC12.85□□□□□ -0.35
Odf4Q8VI88 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC12.85□□□□□ -0.35
Odf4Q8VI88 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
Odf4Q8VI88 Gm10499-201ENSMUST00000174094 934 ntBASIC12.85□□□□□ -0.35
Odf4Q8VI88 Gm8318-201ENSMUST00000182954 872 ntBASIC12.85□□□□□ -0.35
Odf4Q8VI88 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Odf4Q8VI88 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC12.85□□□□□ -0.35
Odf4Q8VI88 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC12.85□□□□□ -0.35
Odf4Q8VI88 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Odf4Q8VI88 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Odf4Q8VI88 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Odf4Q8VI88 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
Odf4Q8VI88 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Odf4Q8VI88 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Odf4Q8VI88 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC12.85□□□□□ -0.35
Odf4Q8VI88 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Odf4Q8VI88 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Odf4Q8VI88 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Odf4Q8VI88 AC119177.1-201ENSMUST00000227647 1332 ntBASIC12.85□□□□□ -0.35
Odf4Q8VI88 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Odf4Q8VI88 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Odf4Q8VI88 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Odf4Q8VI88 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Odf4Q8VI88 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Odf4Q8VI88 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Odf4Q8VI88 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Odf4Q8VI88 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Odf4Q8VI88 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Odf4Q8VI88 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Odf4Q8VI88 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Odf4Q8VI88 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Odf4Q8VI88 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Odf4Q8VI88 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Odf4Q8VI88 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Odf4Q8VI88 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Odf4Q8VI88 Gm15920-201ENSMUST00000118998 402 ntBASIC12.84□□□□□ -0.35
Odf4Q8VI88 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC12.84□□□□□ -0.35
Odf4Q8VI88 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Odf4Q8VI88 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC12.84□□□□□ -0.35
Odf4Q8VI88 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC12.84□□□□□ -0.35
Odf4Q8VI88 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC12.84□□□□□ -0.35
Odf4Q8VI88 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Odf4Q8VI88 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Odf4Q8VI88 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Odf4Q8VI88 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Odf4Q8VI88 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Odf4Q8VI88 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Odf4Q8VI88 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Odf4Q8VI88 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Odf4Q8VI88 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.84□□□□□ -0.35
Odf4Q8VI88 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Odf4Q8VI88 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Odf4Q8VI88 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Odf4Q8VI88 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Odf4Q8VI88 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Odf4Q8VI88 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Odf4Q8VI88 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Odf4Q8VI88 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Odf4Q8VI88 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Odf4Q8VI88 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Odf4Q8VI88 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Odf4Q8VI88 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Odf4Q8VI88 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Odf4Q8VI88 Gm12008-201ENSMUST00000117791 755 ntBASIC12.83□□□□□ -0.36
Odf4Q8VI88 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC12.83□□□□□ -0.36
Odf4Q8VI88 Auts2-212ENSMUST00000178555 309 ntBASIC12.83□□□□□ -0.36
Odf4Q8VI88 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Odf4Q8VI88 AC160980.1-201ENSMUST00000224136 970 ntBASIC12.83□□□□□ -0.36
Odf4Q8VI88 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
Odf4Q8VI88 Gm8396-201ENSMUST00000057361 823 ntBASIC12.83□□□□□ -0.36
Odf4Q8VI88 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Odf4Q8VI88 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Odf4Q8VI88 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Odf4Q8VI88 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Odf4Q8VI88 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Odf4Q8VI88 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Odf4Q8VI88 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Odf4Q8VI88 AC157650.3-201ENSMUST00000225058 1476 ntBASIC12.83□□□□□ -0.36
Odf4Q8VI88 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Odf4Q8VI88 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Odf4Q8VI88 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC12.83□□□□□ -0.36
Odf4Q8VI88 Gm26513-201ENSMUST00000181802 2489 ntBASIC12.83□□□□□ -0.36
Odf4Q8VI88 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Odf4Q8VI88 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Odf4Q8VI88 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms