Protein–RNA interactions for Protein: Q8VEJ9

Vps4a, Vacuolar protein sorting-associated protein 4A, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4aQ8VEJ9 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps4aQ8VEJ9 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps4aQ8VEJ9 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps4aQ8VEJ9 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Vps4aQ8VEJ9 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
Vps4aQ8VEJ9 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Vps4aQ8VEJ9 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Vps4aQ8VEJ9 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Vps4aQ8VEJ9 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps4aQ8VEJ9 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps4aQ8VEJ9 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps4aQ8VEJ9 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps4aQ8VEJ9 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps4aQ8VEJ9 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps4aQ8VEJ9 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vps4aQ8VEJ9 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vps4aQ8VEJ9 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vps4aQ8VEJ9 AC025913.2-201ENSMUST00000220136 1766 ntBASIC13.91□□□□□ -0.18
Vps4aQ8VEJ9 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Vps4aQ8VEJ9 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vps4aQ8VEJ9 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vps4aQ8VEJ9 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC13.91□□□□□ -0.18
Vps4aQ8VEJ9 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vps4aQ8VEJ9 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Vps4aQ8VEJ9 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vps4aQ8VEJ9 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Vps4aQ8VEJ9 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
Vps4aQ8VEJ9 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vps4aQ8VEJ9 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vps4aQ8VEJ9 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vps4aQ8VEJ9 Gm15427-201ENSMUST00000117288 531 ntBASIC13.91□□□□□ -0.18
Vps4aQ8VEJ9 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC13.91□□□□□ -0.18
Vps4aQ8VEJ9 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Vps4aQ8VEJ9 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC13.91□□□□□ -0.18
Vps4aQ8VEJ9 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Vps4aQ8VEJ9 Gm25948-201ENSMUST00000175334 112 ntBASIC13.91□□□□□ -0.18
Vps4aQ8VEJ9 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Vps4aQ8VEJ9 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Vps4aQ8VEJ9 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Vps4aQ8VEJ9 Gm17968-201ENSMUST00000194902 784 ntBASIC13.91□□□□□ -0.18
Vps4aQ8VEJ9 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Vps4aQ8VEJ9 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC13.91□□□□□ -0.18
Vps4aQ8VEJ9 AC140397.2-201ENSMUST00000224213 834 ntBASIC13.91□□□□□ -0.18
Vps4aQ8VEJ9 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Vps4aQ8VEJ9 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vps4aQ8VEJ9 Gm13332-201ENSMUST00000120451 1398 ntBASIC13.91□□□□□ -0.18
Vps4aQ8VEJ9 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vps4aQ8VEJ9 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vps4aQ8VEJ9 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Vps4aQ8VEJ9 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vps4aQ8VEJ9 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.91□□□□□ -0.18
Vps4aQ8VEJ9 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC13.9□□□□□ -0.18
Vps4aQ8VEJ9 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vps4aQ8VEJ9 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Vps4aQ8VEJ9 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vps4aQ8VEJ9 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vps4aQ8VEJ9 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vps4aQ8VEJ9 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vps4aQ8VEJ9 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Vps4aQ8VEJ9 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vps4aQ8VEJ9 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC13.9□□□□□ -0.18
Vps4aQ8VEJ9 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vps4aQ8VEJ9 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Vps4aQ8VEJ9 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Vps4aQ8VEJ9 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Vps4aQ8VEJ9 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vps4aQ8VEJ9 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vps4aQ8VEJ9 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vps4aQ8VEJ9 Rprl2-201ENSMUST00000157150 290 ntBASIC13.9□□□□□ -0.18
Vps4aQ8VEJ9 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC13.9□□□□□ -0.18
Vps4aQ8VEJ9 Mir6977-201ENSMUST00000184960 64 ntBASIC13.9□□□□□ -0.18
Vps4aQ8VEJ9 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC13.9□□□□□ -0.18
Vps4aQ8VEJ9 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Vps4aQ8VEJ9 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Vps4aQ8VEJ9 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC13.9□□□□□ -0.18
Vps4aQ8VEJ9 Gm45612-201ENSMUST00000211320 160 ntBASIC13.9□□□□□ -0.18
Vps4aQ8VEJ9 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC13.9□□□□□ -0.18
Vps4aQ8VEJ9 Gm5626-201ENSMUST00000222151 1058 ntBASIC13.9□□□□□ -0.18
Vps4aQ8VEJ9 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vps4aQ8VEJ9 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Vps4aQ8VEJ9 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vps4aQ8VEJ9 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC13.9□□□□□ -0.18
Vps4aQ8VEJ9 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vps4aQ8VEJ9 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vps4aQ8VEJ9 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Vps4aQ8VEJ9 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Vps4aQ8VEJ9 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vps4aQ8VEJ9 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vps4aQ8VEJ9 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vps4aQ8VEJ9 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.9□□□□□ -0.18
Vps4aQ8VEJ9 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
Vps4aQ8VEJ9 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vps4aQ8VEJ9 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vps4aQ8VEJ9 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vps4aQ8VEJ9 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vps4aQ8VEJ9 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vps4aQ8VEJ9 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vps4aQ8VEJ9 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vps4aQ8VEJ9 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Vps4aQ8VEJ9 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms