Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ndc1Q8VCB1 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ndc1Q8VCB1 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ndc1Q8VCB1 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ndc1Q8VCB1 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ndc1Q8VCB1 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Ndc1Q8VCB1 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ndc1Q8VCB1 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ndc1Q8VCB1 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ndc1Q8VCB1 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Ndc1Q8VCB1 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ndc1Q8VCB1 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ndc1Q8VCB1 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ndc1Q8VCB1 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.51□□□□□ -0.25
Ndc1Q8VCB1 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC13.51□□□□□ -0.25
Ndc1Q8VCB1 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ndc1Q8VCB1 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC13.51□□□□□ -0.25
Ndc1Q8VCB1 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ndc1Q8VCB1 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ndc1Q8VCB1 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Ndc1Q8VCB1 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ndc1Q8VCB1 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ndc1Q8VCB1 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ndc1Q8VCB1 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC13.51□□□□□ -0.25
Ndc1Q8VCB1 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ndc1Q8VCB1 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Ndc1Q8VCB1 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ndc1Q8VCB1 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13.51□□□□□ -0.25
Ndc1Q8VCB1 Gm29310-201ENSMUST00000185468 696 ntBASIC13.51□□□□□ -0.25
Ndc1Q8VCB1 Gm21825-201ENSMUST00000185728 696 ntBASIC13.51□□□□□ -0.25
Ndc1Q8VCB1 Gm29109-201ENSMUST00000185895 696 ntBASIC13.51□□□□□ -0.25
Ndc1Q8VCB1 Gm21896-201ENSMUST00000186520 696 ntBASIC13.51□□□□□ -0.25
Ndc1Q8VCB1 Gm21873-201ENSMUST00000186728 696 ntBASIC13.51□□□□□ -0.25
Ndc1Q8VCB1 Gm21794-201ENSMUST00000187056 696 ntBASIC13.51□□□□□ -0.25
Ndc1Q8VCB1 Gm21880-201ENSMUST00000187275 696 ntBASIC13.51□□□□□ -0.25
Ndc1Q8VCB1 Gm21826-201ENSMUST00000187451 696 ntBASIC13.51□□□□□ -0.25
Ndc1Q8VCB1 Gm21198-201ENSMUST00000188393 696 ntBASIC13.51□□□□□ -0.25
Ndc1Q8VCB1 Gm21749-201ENSMUST00000189343 696 ntBASIC13.51□□□□□ -0.25
Ndc1Q8VCB1 Gm21901-201ENSMUST00000189568 696 ntBASIC13.51□□□□□ -0.25
Ndc1Q8VCB1 Gm29424-201ENSMUST00000189716 696 ntBASIC13.51□□□□□ -0.25
Ndc1Q8VCB1 Gm28599-201ENSMUST00000189838 694 ntBASIC13.51□□□□□ -0.25
Ndc1Q8VCB1 Gm21867-201ENSMUST00000189917 696 ntBASIC13.51□□□□□ -0.25
Ndc1Q8VCB1 Gm29269-201ENSMUST00000190087 696 ntBASIC13.51□□□□□ -0.25
Ndc1Q8VCB1 Gm21722-201ENSMUST00000190153 696 ntBASIC13.51□□□□□ -0.25
Ndc1Q8VCB1 Gm28423-201ENSMUST00000190701 696 ntBASIC13.51□□□□□ -0.25
Ndc1Q8VCB1 Gm21899-201ENSMUST00000190745 696 ntBASIC13.51□□□□□ -0.25
Ndc1Q8VCB1 Gm21910-201ENSMUST00000191163 696 ntBASIC13.51□□□□□ -0.25
Ndc1Q8VCB1 Gm21849-201ENSMUST00000191571 696 ntBASIC13.51□□□□□ -0.25
Ndc1Q8VCB1 Gm28678-201ENSMUST00000191593 696 ntBASIC13.51□□□□□ -0.25
Ndc1Q8VCB1 Gm20910-201ENSMUST00000193268 696 ntBASIC13.51□□□□□ -0.25
Ndc1Q8VCB1 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Ndc1Q8VCB1 Gm21871-201ENSMUST00000194621 696 ntBASIC13.51□□□□□ -0.25
Ndc1Q8VCB1 Olfr286-202ENSMUST00000205305 969 ntBASIC13.51□□□□□ -0.25
Ndc1Q8VCB1 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC13.51□□□□□ -0.25
Ndc1Q8VCB1 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC13.51□□□□□ -0.25
Ndc1Q8VCB1 Gm9182-201ENSMUST00000217829 639 ntBASIC13.51□□□□□ -0.25
Ndc1Q8VCB1 Gm9063-201ENSMUST00000223299 582 ntBASIC13.51□□□□□ -0.25
Ndc1Q8VCB1 Wdyhv1-203ENSMUST00000226889 394 ntBASIC13.51□□□□□ -0.25
Ndc1Q8VCB1 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ndc1Q8VCB1 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ndc1Q8VCB1 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ndc1Q8VCB1 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ndc1Q8VCB1 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ndc1Q8VCB1 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ndc1Q8VCB1 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Ndc1Q8VCB1 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ndc1Q8VCB1 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ndc1Q8VCB1 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ndc1Q8VCB1 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ndc1Q8VCB1 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ndc1Q8VCB1 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ndc1Q8VCB1 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ndc1Q8VCB1 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC13.5□□□□□ -0.25
Ndc1Q8VCB1 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ndc1Q8VCB1 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Ndc1Q8VCB1 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC13.5□□□□□ -0.25
Ndc1Q8VCB1 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ndc1Q8VCB1 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ndc1Q8VCB1 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ndc1Q8VCB1 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC13.5□□□□□ -0.25
Ndc1Q8VCB1 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ndc1Q8VCB1 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ndc1Q8VCB1 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ndc1Q8VCB1 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Ndc1Q8VCB1 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ndc1Q8VCB1 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Ndc1Q8VCB1 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
Ndc1Q8VCB1 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ndc1Q8VCB1 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ndc1Q8VCB1 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Ndc1Q8VCB1 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ndc1Q8VCB1 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.5□□□□□ -0.25
Ndc1Q8VCB1 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ndc1Q8VCB1 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ndc1Q8VCB1 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Ndc1Q8VCB1 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ndc1Q8VCB1 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ndc1Q8VCB1 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.49□□□□□ -0.25
Ndc1Q8VCB1 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC13.49□□□□□ -0.25
Ndc1Q8VCB1 Gm14780-201ENSMUST00000118387 2737 ntBASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms