Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rpap2Q8VC34 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC15.71■□□□□ 0.11
Rpap2Q8VC34 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
Rpap2Q8VC34 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rpap2Q8VC34 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC15.71■□□□□ 0.11
Rpap2Q8VC34 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rpap2Q8VC34 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Rpap2Q8VC34 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Rpap2Q8VC34 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rpap2Q8VC34 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC15.71■□□□□ 0.11
Rpap2Q8VC34 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rpap2Q8VC34 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rpap2Q8VC34 Gm6415-201ENSMUST00000118488 348 ntBASIC15.71■□□□□ 0.11
Rpap2Q8VC34 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Rpap2Q8VC34 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
Rpap2Q8VC34 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC15.71■□□□□ 0.11
Rpap2Q8VC34 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC15.71■□□□□ 0.11
Rpap2Q8VC34 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Rpap2Q8VC34 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC15.71■□□□□ 0.11
Rpap2Q8VC34 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Rpap2Q8VC34 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Rpap2Q8VC34 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rpap2Q8VC34 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Rpap2Q8VC34 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rpap2Q8VC34 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Rpap2Q8VC34 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
Rpap2Q8VC34 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rpap2Q8VC34 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rpap2Q8VC34 Gm45751-201ENSMUST00000210185 1573 ntBASIC15.7■□□□□ 0.1
Rpap2Q8VC34 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Rpap2Q8VC34 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rpap2Q8VC34 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rpap2Q8VC34 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rpap2Q8VC34 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rpap2Q8VC34 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rpap2Q8VC34 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rpap2Q8VC34 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rpap2Q8VC34 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Rpap2Q8VC34 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rpap2Q8VC34 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rpap2Q8VC34 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rpap2Q8VC34 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC15.7■□□□□ 0.1
Rpap2Q8VC34 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Rpap2Q8VC34 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC15.7■□□□□ 0.1
Rpap2Q8VC34 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rpap2Q8VC34 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rpap2Q8VC34 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC15.7■□□□□ 0.1
Rpap2Q8VC34 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC15.7■□□□□ 0.1
Rpap2Q8VC34 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC15.7■□□□□ 0.1
Rpap2Q8VC34 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rpap2Q8VC34 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rpap2Q8VC34 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC15.7■□□□□ 0.1
Rpap2Q8VC34 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rpap2Q8VC34 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rpap2Q8VC34 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rpap2Q8VC34 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rpap2Q8VC34 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rpap2Q8VC34 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rpap2Q8VC34 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Rpap2Q8VC34 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rpap2Q8VC34 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rpap2Q8VC34 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rpap2Q8VC34 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rpap2Q8VC34 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rpap2Q8VC34 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Rpap2Q8VC34 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rpap2Q8VC34 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Rpap2Q8VC34 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC15.69■□□□□ 0.1
Rpap2Q8VC34 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rpap2Q8VC34 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rpap2Q8VC34 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rpap2Q8VC34 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rpap2Q8VC34 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rpap2Q8VC34 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC15.69■□□□□ 0.1
Rpap2Q8VC34 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC15.69■□□□□ 0.1
Rpap2Q8VC34 Gm28630-201ENSMUST00000187806 498 ntBASIC15.69■□□□□ 0.1
Rpap2Q8VC34 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rpap2Q8VC34 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rpap2Q8VC34 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC15.69■□□□□ 0.1
Rpap2Q8VC34 Gm44608-201ENSMUST00000206827 855 ntBASIC15.69■□□□□ 0.1
Rpap2Q8VC34 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
Rpap2Q8VC34 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rpap2Q8VC34 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rpap2Q8VC34 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rpap2Q8VC34 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rpap2Q8VC34 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rpap2Q8VC34 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rpap2Q8VC34 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rpap2Q8VC34 Fgf17-202ENSMUST00000227123 1336 ntBASIC15.68■□□□□ 0.1
Rpap2Q8VC34 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rpap2Q8VC34 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Rpap2Q8VC34 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Rpap2Q8VC34 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rpap2Q8VC34 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
Rpap2Q8VC34 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rpap2Q8VC34 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rpap2Q8VC34 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC15.68■□□□□ 0.1
Rpap2Q8VC34 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rpap2Q8VC34 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC15.68■□□□□ 0.1
Rpap2Q8VC34 AC090659.2-201ENSMUST00000225378 1186 ntBASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms